RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 UAP1Q16222 522 aaPredicted RBP10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 NNATQ16517 81 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 TSNAXIP1Q2TAA8 658 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 DESI1Q6ICB0 168 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 MILR1Q7Z6M3 343 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 IFNEQ86WN2 208 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 PLCZ1Q86YW0 608 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 TRIM42Q8IWZ5 723 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 PLD6Q8N2A8 252 aaKnown RBP10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 GBP7Q8N8V2 638 aaPredicted RBP10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 WDSUB1Q8N9V3 476 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 OR4F6Q8NGB9 312 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 OR52R1Q8NGF1 315 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 SLC44A1Q8WWI5 657 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 TM4SF18Q96CE8 201 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 KLHL29Q96CT2 875 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 ERP27Q96DN0 273 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 PHF21BQ96EK2 531 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 SLC35A4Q96G79 324 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 COL21A1Q96P44 957 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 FAIM2Q9BWQ8 316 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 VPS11Q9H270 941 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 GALNT9Q9HCQ5 603 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 NMRK1Q9NWW6 199 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 PACSIN3Q9UKS6 424 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 SLC12A4Q9UP95 1085 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 MAPRE3Q9UPY8 281 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 PLLPQ9Y342 182 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 MRPS18CQ9Y3D5 142 aaKnown RBP10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 FAM171A2A8MVW0 826 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 A8MXE2 369 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 CASKO14936 926 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 HCRTR2O43614 444 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 SMIM24O75264 130 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 OTCP00480 354 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 CRHP06850 196 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 RPS17P08708 135 aaKnown RBP10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 INHBBP09529 407 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 COL6A2P12110 1019 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 CNTFP26441 200 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 EMDP50402 254 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 HMGCS1Q01581 520 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 LTBQ06643 244 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 TRADDQ15628 312 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 TRMT12Q53H54 448 aaKnown RBP10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 LUZP2Q86TE4 346 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 KRTAP1-3Q8IUG1 177 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 ZNF675Q8TD23 568 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 SELENOMQ8WWX9 145 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 INTS12Q96CB8 462 aaKnown RBP10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 MRRFQ96E11 262 aaKnown RBP10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 CNRIP1Q96F85 164 aaPredicted RBP10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 ZNF681Q96N22 645 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 NSUN5Q96P11 429 aaKnown RBP10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 BTBD9Q96Q07 612 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 PIP5K1AQ99755 562 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 G6PC3Q9BUM1 346 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 C1QTNF3Q9BXJ4 246 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 FUT8Q9BYC5 575 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 ACSS3Q9H6R3 686 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 TAS2R10Q9NYW0 307 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 XPR1Q9UBH6 696 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 NDRG3Q9UGV2 375 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 SNX6Q9UNH7 406 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 EIF3LQ9Y262 564 aaKnown RBP10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 DLGAP4Q9Y2H0 992 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 GPR55Q9Y2T6 319 aaPredicted RBP10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 WIF1Q9Y5W5 379 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 ZNF780BQ9Y6R6 833 aa10.9□□□□□ -0.66
CBX3P4-202ENST00000540428 NIPBLQ6KC79 2804 aaeCLIP10.9□□□□□ -0.67
CBX3P4-202ENST00000540428 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 A0A1W2PPR1 153 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 C2orf72A6NCS6 295 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 PLOD2O00469 737 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 MSTNO14793 375 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 ARHGEF9O43307 516 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 TNFSF13O75888 250 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 PDYNP01213 254 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 FREM3P0C091 2139 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 HSD3B1P14060 373 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 ZNF708P17019 499 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 HSD3B2P26439 372 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 ADSLP30566 484 aaPredicted RBP10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 LHX2P50458 406 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 CLDN18P56856 261 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 NKX6-1P78426 367 aaPredicted RBP10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 SRYQ05066 204 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 DUSP2Q05923 314 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 EFR3AQ14156 821 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 POU4F3Q15319 338 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 BCL2A1Q16548 175 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 ZNF628Q5EBL2 1059 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 SGO1Q5FBB7 561 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 ZNF572Q7Z3I7 529 aaPredicted RBP10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 CXorf67Q86X51 503 aaPredicted RBP10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 RELL1Q8IUW5 271 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 GRAMD2AQ8IUY3 354 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 SAMD14Q8IZD0 417 aaPredicted RBP10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 LRRC75A-AS1Q8N1F1 130 aa10.89□□□□□ -0.67
CBX3P4-202ENST00000540428 SIMC1Q8NDZ2 872 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms