RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 RGS14O43566 566 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 FGF17O60258 216 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 HSPA4LO95757 839 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 FGF4P08620 206 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 CHN1P15882 459 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 CNR1P21554 472 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 GRK2P25098 689 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 TIA1P31483 386 aaKnown RBP eCLIP13.71□□□□□ -0.21
USB1-203ENST00000539737 RNF4P78317 190 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 SPDYAQ5MJ70 313 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 SH2D4BQ5SQS7 431 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 NDUFAF5Q5TEU4 345 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 GALNT18Q6P9A2 607 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 OPN5Q6U736 354 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 SCIMPQ6UWF3 145 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 PLXDC2Q6UX71 529 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 PAMR1Q6UXH9 720 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 RTL4Q6ZR62 310 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 GK5Q6ZS86 529 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 SLC2A12Q8TD20 617 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 ANKRD9Q96BM1 317 aaPredicted RBP13.71□□□□□ -0.21
USB1-203ENST00000539737 SH3GL2Q99962 352 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 FAM173AQ9BQD7 235 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 SIRT5Q9NXA8 310 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 TEX10Q9NXF1 929 aaPredicted RBP13.71□□□□□ -0.21
USB1-203ENST00000539737 FIS1Q9Y3D6 152 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 TRGV5A0A0B4J1U4 118 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 GNG14A0A1W2PPG7 69 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 C1orf226A1L170 272 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 WDR91A4D1P6 747 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 LRRC3CA6NJW4 275 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 NPIPB8E9PQR5 432 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 OR10H2O60403 315 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 PRKRAO75569 313 aaKnown RBP13.7□□□□□ -0.22
USB1-203ENST00000539737 ATE1O95260 518 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 GPR75O95800 540 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 P04436 131 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 ALOX15P16050 662 aaPredicted RBP13.7□□□□□ -0.22
USB1-203ENST00000539737 PRPH2P23942 346 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 SERPINB3P29508 390 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 STT3AP46977 705 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 MPP2Q14168 576 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 TMEM64Q6YI46 380 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 RGS9BPQ6ZS82 235 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 PRIMA1Q86XR5 153 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 GOT1L1Q8NHS2 421 aaPredicted RBP13.7□□□□□ -0.22
USB1-203ENST00000539737 FAM76AQ8TAV0 307 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 SLC22A8Q8TCC7 542 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 TWIST2Q8WVJ9 160 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 PPWD1Q96BP3 646 aaKnown RBP13.7□□□□□ -0.22
USB1-203ENST00000539737 APIPQ96GX9 242 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 SGCZQ96LD1 299 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 JSRP1Q96MG2 331 aaPredicted RBP13.7□□□□□ -0.22
USB1-203ENST00000539737 PAIP2Q9BPZ3 127 aaKnown RBP13.7□□□□□ -0.22
USB1-203ENST00000539737 PROK2Q9HC23 129 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 TRAF6Q9Y4K3 522 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 DNAJC15Q9Y5T4 150 aa13.7□□□□□ -0.22
USB1-203ENST00000539737 ZANQ9Y493 2812 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 OR14I1A6ND48 311 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 PIK3R1P27986 724 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 ABCE1P61221 599 aaKnown RBP13.69□□□□□ -0.22
USB1-203ENST00000539737 BTKQ06187 659 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 ZNF763Q0D2J5 394 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 SLC10A1Q14973 349 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 DEFB113Q30KQ7 82 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 SLC25A35Q3KQZ1 300 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 FLYWCH1Q4VC44 716 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 WLSQ5T9L3 541 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 C6orf163Q5TEZ5 329 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 BICRALQ6AI39 1079 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 POMZP3Q6PJE2 187 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 LYPD8Q6UX82 237 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 DDIASQ8IXT1 998 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 ULK2Q8IYT8 1036 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 ST13P4Q8IZP2 240 aaPredicted RBP13.69□□□□□ -0.22
USB1-203ENST00000539737 CIARTQ8N365 385 aaPredicted RBP13.69□□□□□ -0.22
USB1-203ENST00000539737 AGR3Q8TD06 166 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 C11orf24Q96F05 449 aaPredicted RBP13.69□□□□□ -0.22
USB1-203ENST00000539737 ATP6V1G3Q96LB4 118 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 ALPK1Q96QP1 1244 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 CCT7Q99832 543 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 ACBD3Q9H3P7 528 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 ZNF703Q9H7S9 590 aaPredicted RBP13.69□□□□□ -0.22
USB1-203ENST00000539737 PFDN4Q9NQP4 134 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 SACM1LQ9NTJ5 587 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 RYDENQ9NUL5 291 aaKnown RBP13.69□□□□□ -0.22
USB1-203ENST00000539737 C1orf109Q9NX04 203 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 PCDHA9Q9Y5H5 950 aa13.69□□□□□ -0.22
USB1-203ENST00000539737 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.69□□□□□ -0.22
USB1-203ENST00000539737 CSPG4Q6UVK1 2322 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 GLOD5A6NK44 160 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 WASHC1A8K0Z3 465 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 TMEM233B4DJY2 109 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 ANXA4P09525 319 aaPredicted RBP13.68□□□□□ -0.22
USB1-203ENST00000539737 BGNP21810 368 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 ARRB2P32121 409 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 GALNSP34059 522 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 RAE1P78406 368 aaKnown RBP13.68□□□□□ -0.22
USB1-203ENST00000539737 HEPACAMQ14CZ8 416 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 RIPPLY2Q5TAB7 128 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms