RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 TAGAPQ8N103 731 aa11.73□□□□□ -0.53
TSPAN9-207ENST00000539631 CLEC4FQ8N1N0 589 aa11.73□□□□□ -0.53
TSPAN9-207ENST00000539631 VPS37AQ8NEZ2 397 aa11.73□□□□□ -0.53
TSPAN9-207ENST00000539631 OR5AK3PQ8NH89 298 aa11.73□□□□□ -0.53
TSPAN9-207ENST00000539631 C10orf82Q8WW14 230 aa11.73□□□□□ -0.53
TSPAN9-207ENST00000539631 HSPBAP1Q96EW2 488 aa11.73□□□□□ -0.53
TSPAN9-207ENST00000539631 SCMH1Q96GD3 660 aa11.73□□□□□ -0.53
TSPAN9-207ENST00000539631 C16orf58Q96GQ5 468 aa11.73□□□□□ -0.53
TSPAN9-207ENST00000539631 BTBD9Q96Q07 612 aa11.73□□□□□ -0.53
TSPAN9-207ENST00000539631 NEUROD4Q9HD90 331 aa11.73□□□□□ -0.53
TSPAN9-207ENST00000539631 KLHL1Q9NR64 748 aa11.73□□□□□ -0.53
TSPAN9-207ENST00000539631 CCDC167Q9P0B6 97 aa11.73□□□□□ -0.53
TSPAN9-207ENST00000539631 BTNL2Q9UIR0 455 aa11.73□□□□□ -0.53
TSPAN9-207ENST00000539631 ANAPC2Q9UJX6 822 aa11.73□□□□□ -0.53
TSPAN9-207ENST00000539631 PCDHGB4Q9UN71 923 aa11.73□□□□□ -0.53
TSPAN9-207ENST00000539631 TRIM33Q9UPN9 1127 aa11.73□□□□□ -0.53
TSPAN9-207ENST00000539631 NPFFR2Q9Y5X5 522 aa11.73□□□□□ -0.53
TSPAN9-207ENST00000539631 BOD1L1Q8NFC6 3051 aa11.73□□□□□ -0.53
TSPAN9-207ENST00000539631 FLNBO75369 2602 aaKnown RBP11.73□□□□□ -0.53
TSPAN9-207ENST00000539631 ASH1LQ9NR48 2969 aaKnown RBP11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 GMNCA6NCL1 334 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 TO15178 435 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 SORBS2O94875 1100 aaKnown RBP11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 SP1P08047 785 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 FBXO45P0C2W1 286 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 CD46P15529 392 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 DRD4P21917 467 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 ABCD3P28288 659 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 CDKN2CP42773 168 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 CCT3P49368 545 aaKnown RBP11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 NRG3P56975 720 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 IRX1P78414 480 aaPredicted RBP11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 PRR5P85299 388 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 AGKQ53H12 422 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 METTL21CQ5VZV1 264 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 SLC25A25Q6KCM7 469 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 MDGA2Q7Z553 956 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 SLC44A2Q8IWA5 706 aaPredicted RBP11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 HORMAD2Q8N7B1 307 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 OR4N2Q8NGD1 307 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 FBXO30Q8TB52 745 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 SFXN5Q8TD22 340 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 VPS33AQ96AX1 596 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 SPACA9Q96E40 222 aaPredicted RBP11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 OMA1Q96E52 524 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 OTUB1Q96FW1 271 aaPredicted RBP11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 C5orf34Q96MH7 638 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 CCDC115Q96NT0 180 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 MS4A4EQ96PG1 132 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 ELAC2Q9BQ52 826 aaKnown RBP11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 YIPF4Q9BSR8 244 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 INPP5KQ9BT40 448 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 LMF2Q9BU23 707 aaKnown RBP11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 FAM107BQ9H098 131 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 PCDHGA10Q9Y5H3 936 aa11.72□□□□□ -0.53
TSPAN9-207ENST00000539631 RNF103-CHMP3A0A140T963 221 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 B8ZZF3 427 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 NR5A2O00482 541 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 ACOX3O15254 700 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 SUV39H1O43463 412 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 SLC25A12O75746 678 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 HMGN2P05204 90 aaKnown RBP11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 ACP2P11117 423 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 MAP3K8P41279 467 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 FBXW4P57775 412 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 KCNK10P57789 538 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 PLCXD2Q0VAA5 305 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 GAB1Q13480 694 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 TP53BP2Q13625 1128 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 LASP1Q14847 261 aaKnown RBP11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 NTRK2Q16620 822 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 MAPKAPK3Q16644 382 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 TIGD2Q4W5G0 525 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 DESI1Q6ICB0 168 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 MFSD12Q6NUT3 480 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 BLOC1S3Q6QNY0 202 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 RTL4Q6ZR62 310 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 GK5Q6ZS86 529 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 GALNTL5Q7Z4T8 443 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 SLC34A3Q8N130 599 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 CDRT4Q8N9R6 151 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 FAM13CQ8NE31 585 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 OR10G3Q8NGC4 313 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 OR56A1Q8NGH5 318 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 OR5M3Q8NGP4 307 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 GOT1L1Q8NHS2 421 aaPredicted RBP11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 SLC9A6Q92581 669 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 HOXB13Q92826 284 aaPredicted RBP11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 TMBIM1Q969X1 311 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 TMEM125Q96AQ2 219 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 MOAP1Q96BY2 351 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 PANX1Q96RD7 426 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 RABEP2Q9H5N1 569 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 SERHLQ9NQF3 203 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 MAP10Q9P2G4 905 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 PCDHGB6Q9Y5F9 930 aa11.71□□□□□ -0.53
TSPAN9-207ENST00000539631 IGSF10Q6WRI0 2623 aa11.71□□□□□ -0.54
TSPAN9-207ENST00000539631 GCN1Q92616 2671 aaKnown RBP11.7□□□□□ -0.54
TSPAN9-207ENST00000539631 MAST4O15021 2626 aa11.7□□□□□ -0.54
TSPAN9-207ENST00000539631 GXYLT2A0PJZ3 443 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms