RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 OR7D2Q96RA2 312 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 MESP1Q9BRJ9 268 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 SPATA9Q9BWV2 254 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 ACTRT3Q9BYD9 372 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 TRIM15Q9C019 465 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 B3GNT4Q9C0J1 378 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 FOLH1BQ9HBA9 442 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 THSD1Q9NS62 852 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 GPATCH2Q9NW75 528 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 COPS7AQ9UBW8 275 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 POMPQ9Y244 141 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 SNX13Q9Y5W8 968 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 KNTC1P50748 2209 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 TMEM247A6NEH6 219 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 SAGE2PA6NJ88 616 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 CDRT15L2A8MXV6 281 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 C5orf58C9J3I9 102 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 ARPC2O15144 300 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 SLC28A2O43868 658 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 BCAS2O75934 225 aaPredicted RBP13.16□□□□□ -0.3
CD4-208ENST00000538827 IGHEP01854 428 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 BCHEP06276 602 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 UMODP07911 640 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 IFI6P09912 130 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 ALOX5P09917 674 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 RAB40ALP0C0E4 278 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 OR12D1P0DN82 309 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 ACP2P11117 423 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 ATP6V1B2P21281 511 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 HTR1EP28566 365 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 SOX18P35713 384 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 CORO7P57737 925 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 SCARB2Q14108 478 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 KPNB1Q14974 876 aaKnown RBP13.16□□□□□ -0.3
CD4-208ENST00000538827 SPATS1Q496A3 300 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 CDC73Q6P1J9 531 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 CYP2R1Q6VVX0 501 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 RNF111Q6ZNA4 994 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 NET1Q7Z628 596 aaPredicted RBP13.16□□□□□ -0.3
CD4-208ENST00000538827 CALHM3Q86XJ0 350 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 ZNF843Q8N446 348 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 ZNF321PQ8N8H1 164 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 ADAMTS15Q8TE58 950 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 MAL2Q969L2 176 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 FAM162AQ96A26 154 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 CTHRC1Q96CG8 243 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 ASB9Q96DX5 294 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 GIMAP5Q96F15 307 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 FBXL20Q96IG2 436 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 ZNF578Q96N58 590 aaPredicted RBP13.16□□□□□ -0.3
CD4-208ENST00000538827 GAL3ST4Q96RP7 486 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 LPAR4Q99677 370 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 SPRY4Q9C004 299 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 OR10A5Q9H207 317 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 ASCL3Q9NQ33 180 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 P2RX2Q9UBL9 471 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 ZNF639Q9UID6 485 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 MAGEL2Q9UJ55 1249 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 ANGPT4Q9Y264 503 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 FARSAQ9Y285 508 aaKnown RBP13.16□□□□□ -0.3
CD4-208ENST00000538827 GMEB1Q9Y692 573 aa13.16□□□□□ -0.3
CD4-208ENST00000538827 LOC101059948A0A1B0GTJ6 334 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 C21orf140B9A014 251 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 CXCR6O00574 342 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 TNFRSF21O75509 655 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 ARAFP10398 606 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 GGT1P19440 569 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 PCGF2P35227 344 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 GZMMP51124 257 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 HPCAP84074 193 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 FUT7Q11130 342 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 TRIM25Q14258 630 aaKnown RBP13.15□□□□□ -0.3
CD4-208ENST00000538827 ZNHIT3Q15649 155 aaPredicted RBP13.15□□□□□ -0.3
CD4-208ENST00000538827 NNATQ16517 81 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 VMACQ2NL98 169 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 LRRC23Q53EV4 343 aaPredicted RBP13.15□□□□□ -0.3
CD4-208ENST00000538827 TMEM205Q6UW68 189 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 C16orf62Q7Z3J2 963 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 DHFR2Q86XF0 187 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 PTOV1Q86YD1 416 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 LGI4Q8N135 537 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 COX18Q8N8Q8 333 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 C11orf65Q8NCR3 313 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 BHLHE22Q8NFJ8 381 aaPredicted RBP13.15□□□□□ -0.3
CD4-208ENST00000538827 OR7G1Q8NGA0 311 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 WDR60Q8WVS4 1066 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 XAGE5Q8WWM1 108 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 CDS1Q92903 461 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 KIAA1143Q96AT1 154 aaPredicted RBP13.15□□□□□ -0.3
CD4-208ENST00000538827 SENP5Q96HI0 755 aaPredicted RBP13.15□□□□□ -0.3
CD4-208ENST00000538827 RSRC1Q96IZ7 334 aaKnown RBP13.15□□□□□ -0.3
CD4-208ENST00000538827 NUDT9Q9BW91 350 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 ITPAQ9BY32 194 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 NRSN2Q9GZP1 204 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 MUC13Q9H3R2 512 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 NTMQ9P121 344 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 PRODH2Q9UF12 536 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 TCFL5Q9UL49 500 aa13.15□□□□□ -0.3
CD4-208ENST00000538827 HEMK1Q9Y5R4 338 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms