RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 OR2L5Q8NG80 312 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 MS4A6EQ96DS6 147 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 GMPPAQ96IJ6 420 aaPredicted RBP8.19□□□□□ -1.1
USP28-205ENST00000537706 SUCNR1Q9BXA5 334 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 REXO4Q9GZR2 422 aaKnown RBP8.19□□□□□ -1.1
USP28-205ENST00000537706 CHRAC1Q9NRG0 131 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 MOCS1Q9NZB8 636 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 MGAT4BQ9UQ53 548 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 MRPS18CQ9Y3D5 142 aaKnown RBP8.19□□□□□ -1.1
USP28-205ENST00000537706 GOLGA6L10A0A0M3HER8 536 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 C4orf51C9J302 202 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 RAD51CO43502 376 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 TJP3O95049 919 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 ALOX15P16050 662 aaPredicted RBP8.19□□□□□ -1.1
USP28-205ENST00000537706 CPN2P22792 545 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 CERS1P27544 350 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 CTNNA1P35221 906 aaKnown RBP8.19□□□□□ -1.1
USP28-205ENST00000537706 FABP6P51161 128 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 CHN2P52757 468 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 ZNF844Q08AG5 666 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 DEPDC1Q5TB30 811 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 C6orf163Q5TEZ5 329 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 UGT3A1Q6NUS8 523 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 NXPE4Q6UWF7 544 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 ZNF793Q6ZN11 406 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 NUP54Q7Z3B4 507 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 PIWIL4Q7Z3Z4 852 aaKnown RBP8.19□□□□□ -1.1
USP28-205ENST00000537706 PLCZ1Q86YW0 608 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 KRT78Q8N1N4 520 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 MYO1HQ8N1T3 1032 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 MUC15Q8N387 334 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 SRFBP1Q8NEF9 429 aaKnown RBP8.19□□□□□ -1.1
USP28-205ENST00000537706 OR56A3Q8NH54 315 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 FNDC9Q8TBE3 224 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 PIWIL2Q8TC59 973 aaKnown RBP8.19□□□□□ -1.1
USP28-205ENST00000537706 ALG3Q92685 438 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 HTRA1Q92743 480 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 KCNJ9Q92806 393 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 HPS1Q92902 700 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 TSNARE1Q96NA8 513 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 TRMOQ9BU70 441 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 POTEKPQ9BYX7 375 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 GLRX2Q9NS18 164 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 INTS10Q9NVR2 710 aaKnown RBP8.19□□□□□ -1.1
USP28-205ENST00000537706 XPR1Q9UBH6 696 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 DHRS7Q9Y394 339 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 COMMD10Q9Y6G5 202 aa8.19□□□□□ -1.1
USP28-205ENST00000537706 IGHV4-61A0A0C4DH41 118 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 LOC390937A0A1W2PQ73 354 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 LRIT2A6NDA9 550 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 ANKDD1BA6NHY2 528 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 AP3B1O00203 1094 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 ICOSLGO75144 302 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 FGGP02679 453 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 NAGAP17050 411 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 IL11P20809 199 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 NPY2RP49146 381 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 DVL1P1P54792 670 aaPredicted RBP8.18□□□□□ -1.1
USP28-205ENST00000537706 SLC37A1P57057 533 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 IRF9Q00978 393 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 GUCY2DQ02846 1103 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 SPRED3Q2MJR0 410 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 HSP90B2PQ58FF3 399 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 C11orf71Q6IPW1 123 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 MBOAT1Q6ZNC8 495 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 KLHL7Q8IXQ5 586 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 ZNF619Q8N2I2 560 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 MREGQ8N565 214 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 NEIL2Q969S2 332 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 PPWD1Q96BP3 646 aaKnown RBP8.18□□□□□ -1.1
USP28-205ENST00000537706 FAM118BQ9BPY3 351 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 SPNS1Q9H2V7 528 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 STOML1Q9UBI4 398 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 IKZF3Q9UKT9 509 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 KCNE2Q9Y6J6 123 aa8.18□□□□□ -1.1
USP28-205ENST00000537706 SEC14L5O43304 696 aa8.17□□□□□ -1.1
USP28-205ENST00000537706 CLEC3AO75596 197 aa8.17□□□□□ -1.1
USP28-205ENST00000537706 RGS9O75916 674 aaPredicted RBP8.17□□□□□ -1.1
USP28-205ENST00000537706 SNUPNO95149 360 aaKnown RBP8.17□□□□□ -1.1
USP28-205ENST00000537706 VAPBO95292 243 aa8.17□□□□□ -1.1
USP28-205ENST00000537706 ARAFP10398 606 aa8.17□□□□□ -1.1
USP28-205ENST00000537706 TLX1P31314 330 aaPredicted RBP8.17□□□□□ -1.1
USP28-205ENST00000537706 ARFIP2P53365 341 aa8.17□□□□□ -1.1
USP28-205ENST00000537706 AP1S2P56377 157 aa8.17□□□□□ -1.1
USP28-205ENST00000537706 MRPS25P82663 173 aaKnown RBP8.17□□□□□ -1.1
USP28-205ENST00000537706 DHX9Q08211 1270 aaKnown RBP8.17□□□□□ -1.1
USP28-205ENST00000537706 GUSBP1Q15486 140 aa8.17□□□□□ -1.1
USP28-205ENST00000537706 TAB1Q15750 504 aa8.17□□□□□ -1.1
USP28-205ENST00000537706 SEL1L2Q5TEA6 688 aa8.17□□□□□ -1.1
USP28-205ENST00000537706 FIGNL1Q6PIW4 674 aa8.17□□□□□ -1.1
USP28-205ENST00000537706 GLCCI1Q86VQ1 547 aa8.17□□□□□ -1.1
USP28-205ENST00000537706 CPNE9Q8IYJ1 553 aa8.17□□□□□ -1.1
USP28-205ENST00000537706 ST13P4Q8IZP2 240 aaPredicted RBP8.17□□□□□ -1.1
USP28-205ENST00000537706 RIT1Q92963 219 aa8.17□□□□□ -1.1
USP28-205ENST00000537706 MUCL1Q96DR8 90 aa8.17□□□□□ -1.1
USP28-205ENST00000537706 OSBPL8Q9BZF1 889 aa8.17□□□□□ -1.1
USP28-205ENST00000537706 DDX47Q9H0S4 455 aaKnown RBP8.17□□□□□ -1.1
USP28-205ENST00000537706 TREX1Q9NSU2 369 aa8.17□□□□□ -1.1
USP28-205ENST00000537706 TRMT6Q9UJA5 497 aaKnown RBP8.17□□□□□ -1.1
USP28-205ENST00000537706 USP22Q9UPT9 525 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms