RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SEMA6DQ8NFY4 1073 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 OR52B4Q8NGK2 314 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 OR10K1Q8NGX5 313 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 OR4Q3Q8NH05 313 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 GPR148Q8TDV2 347 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 TSPEARQ8WU66 669 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 ERMAPQ96PL5 475 aaPredicted RBP3.52□□□□□ -1.85
MCF2-210ENST00000536274 CSPG4P5Q96PW8 444 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 OR1F2PQ96R84 312 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 RIT2Q99578 217 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 FEVQ99581 238 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 INPP5KQ9BT40 448 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 KATNB1Q9BVA0 655 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 AMNQ9BXJ7 453 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 FRMD8P1Q9BZ68 369 aaPredicted RBP3.52□□□□□ -1.85
MCF2-210ENST00000536274 POLR2J2Q9GZM3 115 aaKnown RBP3.52□□□□□ -1.85
MCF2-210ENST00000536274 FXYD6Q9H0Q3 95 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 TLNRD1Q9H1K6 362 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 RHOJQ9H4E5 214 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 ACTL8Q9H568 366 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 ATP13A1Q9HD20 1204 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 CCNB1IP1Q9NPC3 277 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 EQTNQ9NQ60 294 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 POLE3Q9NRF9 147 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 GALPQ9UBC7 116 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 RHCGQ9UBD6 479 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 IL20RAQ9UHF4 553 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 ZMYM5Q9UJ78 669 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 ZNF225Q9UK10 706 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 CA14Q9ULX7 337 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 SCN10AQ9Y5Y9 1956 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 PTPRSQ13332 1948 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 GON4LQ3T8J9 2241 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 DDTLA6NHG4 134 aaPredicted RBP3.52□□□□□ -1.85
MCF2-210ENST00000536274 A6NNC1 897 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 MPTX1A8MV57 137 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 FAM72CH0Y354 149 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 DHX15O43143 795 aaKnown RBP3.52□□□□□ -1.85
MCF2-210ENST00000536274 DUSP11O75319 330 aaKnown RBP3.52□□□□□ -1.85
MCF2-210ENST00000536274 FARS2O95363 451 aaKnown RBP3.52□□□□□ -1.85
MCF2-210ENST00000536274 SOX14O95416 240 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 PEX11BO96011 259 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 TFP02787 698 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 FGF4P08620 206 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 HSD3B1P14060 373 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 TMEM11P17152 192 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 ELK1P19419 428 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 EIF2S3P41091 472 aaKnown RBP3.52□□□□□ -1.85
MCF2-210ENST00000536274 CDKN2CP42773 168 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 MAGEA2P43356 314 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 ILF3Q12906 894 aaKnown RBP eCLIP3.52□□□□□ -1.85
MCF2-210ENST00000536274 PRKG2Q13237 762 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 KEAP1Q14145 624 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 TTLL4Q14679 1199 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 SURF1Q15526 300 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 FAM189A2Q15884 450 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 C2orf68Q2NKX9 166 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 FAM174BQ3ZCQ3 159 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 SLC39A12Q504Y0 691 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 PLA1AQ53H76 456 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 FAM72AQ5TYM5 149 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 OVOS1Q6IE37 1185 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 OR2T5Q6IEZ7 315 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 FAM72DQ6L9T8 149 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 VHLLQ6RSH7 139 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 ASPGQ86U10 573 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 FAM72BQ86X60 149 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 MEX3DQ86XN8 651 aaKnown RBP3.52□□□□□ -1.85
MCF2-210ENST00000536274 FOXRED2Q8IWF2 684 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 SLC5A8Q8N695 610 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 PPHLN1Q8NEY8 458 aaKnown RBP3.52□□□□□ -1.85
MCF2-210ENST00000536274 OR2T29Q8NH02 315 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 OR10J5Q8NHC4 309 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 SLC13A3Q8WWT9 602 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 EDEM1Q92611 657 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 SLC25A46Q96AG3 418 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 RDH12Q96NR8 316 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 HHIPQ96QV1 700 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 GAL3ST4Q96RP7 486 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 TRIM62Q9BVG3 475 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 REEP4Q9H6H4 257 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 EMC7Q9NPA0 242 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 IL23AQ9NPF7 189 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 TLR8Q9NR97 1041 aaKnown RBP3.52□□□□□ -1.85
MCF2-210ENST00000536274 PDGFCQ9NRA1 345 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 DZANK1Q9NVP4 752 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 GPN3Q9UHW5 284 aaPredicted RBP3.52□□□□□ -1.85
MCF2-210ENST00000536274 ASF1AQ9Y294 204 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 CA5BQ9Y2D0 317 aa3.52□□□□□ -1.85
MCF2-210ENST00000536274 DNAJC25-GNG10A0A024R161 153 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 C5orf52A6NGY3 159 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 C1orf196B1AJZ1 125 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ZNF670-ZNF695F2Z2N8 137 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 CASKO14936 926 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 KLF4O43474 513 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 SUSD5O60279 629 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 TLR5O60602 858 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 FZD7O75084 574 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 VPS4BO75351 444 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 LRATO95237 230 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms