RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 LDLRP01130 860 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 LAMP1P11279 417 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 GPX3P22352 226 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 GPC1P35052 558 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 SOX18P35713 384 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 MC3RP41968 323 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 KIR3DL1P43629 444 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 SSR4P51571 173 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 MANFP55145 182 aaKnown RBP11.72□□□□□ -0.53
DDB1-207ENST00000535967 DCAF7P61962 342 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 MRPS35P82673 323 aaKnown RBP11.72□□□□□ -0.53
DDB1-207ENST00000535967 LRRC74AQ0VAA2 488 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 TRMT12Q53H54 448 aaKnown RBP11.72□□□□□ -0.53
DDB1-207ENST00000535967 HLA-DQA1Q5Y7H0 255 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 TMEM107Q6UX40 140 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 DND1Q8IYX4 353 aaKnown RBP11.72□□□□□ -0.53
DDB1-207ENST00000535967 OR2L13Q8N349 312 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 SLC15A4Q8N697 577 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 HORMAD2Q8N7B1 307 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 OR7G2Q8NG99 324 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 OR52R1Q8NGF1 315 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 C16orf52Q8NHV5 167 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 RFWD2Q8NHY2 731 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 THAP3Q8WTV1 239 aaPredicted RBP11.72□□□□□ -0.53
DDB1-207ENST00000535967 KAT2AQ92830 837 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 TP53INP1Q96A56 240 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 PNPLA2Q96AD5 504 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 GAL3ST4Q96RP7 486 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 UTP23Q9BRU9 249 aaKnown RBP11.72□□□□□ -0.53
DDB1-207ENST00000535967 TRIM45Q9H8W5 580 aaPredicted RBP11.72□□□□□ -0.53
DDB1-207ENST00000535967 ZBTB20Q9HC78 741 aaPredicted RBP11.72□□□□□ -0.53
DDB1-207ENST00000535967 DDX18Q9NVP1 670 aaKnown RBP11.72□□□□□ -0.53
DDB1-207ENST00000535967 FAM120CQ9NX05 1096 aaKnown RBP11.72□□□□□ -0.53
DDB1-207ENST00000535967 TAS2R9Q9NYW1 312 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 BCAP29Q9UHQ4 241 aa11.72□□□□□ -0.53
DDB1-207ENST00000535967 C19orf53Q9UNZ5 99 aaPredicted RBP11.72□□□□□ -0.53
DDB1-207ENST00000535967 A0A1W2PRB8 838 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 ENO4A6NNW6 628 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 RNASET2O00584 256 aaKnown RBP11.71□□□□□ -0.53
DDB1-207ENST00000535967 PSMG1O95456 288 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 WDPCPO95876 746 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 PTGER1P34995 402 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 HLCSP50747 726 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 ATP4BP51164 291 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 DUSP8Q13202 625 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 TUBA3CQ13748 450 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 EXOSC7Q15024 291 aaKnown RBP11.71□□□□□ -0.53
DDB1-207ENST00000535967 TLR1Q15399 786 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 PGS1Q32NB8 556 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 ANXA8L1Q5VT79 327 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 TMEM198Q66K66 360 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 TUBA3EQ6PEY2 450 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 OPN5Q6U736 354 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 TMEM64Q6YI46 380 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 Q6ZS92 163 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 ZNF551Q7Z340 670 aaPredicted RBP11.71□□□□□ -0.53
DDB1-207ENST00000535967 MIER2Q8N344 545 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 ZNF441Q8N8Z8 693 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 VPS37AQ8NEZ2 397 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 PSMA8Q8TAA3 256 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 DOK4Q8TEW6 326 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 OR5P2Q8WZ92 322 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 MOAP1Q96BY2 351 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 ELP4Q96EB1 424 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 ZNF317Q96PQ6 595 aaPredicted RBP11.71□□□□□ -0.53
DDB1-207ENST00000535967 RASL10BQ96S79 203 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 C3orf14Q9HBI5 128 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 MRGBPQ9NV56 204 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 TMEM45AQ9NWC5 275 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 TRIM33Q9UPN9 1127 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 B3GNT3Q9Y2A9 372 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 PCDHGB6Q9Y5F9 930 aa11.71□□□□□ -0.53
DDB1-207ENST00000535967 NUP214P35658 2090 aaPredicted RBP11.7□□□□□ -0.54
DDB1-207ENST00000535967 FBN2P35556 2912 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 TRAV17A0A0B4J275 112 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 A0A0G2JND7 137 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 TTC36A6NLP5 189 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 WWP2O00308 870 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 ACOX3O15254 700 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 MAN1A2O60476 641 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 SLC22A3O75751 556 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 OR2J2O76002 312 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 S100A3P33764 101 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 CYB561P49447 251 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 TMED10P49755 219 aaKnown RBP11.7□□□□□ -0.54
DDB1-207ENST00000535967 SMCPP49901 116 aaPredicted RBP11.7□□□□□ -0.54
DDB1-207ENST00000535967 EMDP50402 254 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 TNFSF10P50591 281 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 CDK9P50750 372 aaKnown RBP11.7□□□□□ -0.54
DDB1-207ENST00000535967 NRG3P56975 720 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 UFM1P61960 85 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 ZNF169Q14929 603 aaPredicted RBP11.7□□□□□ -0.54
DDB1-207ENST00000535967 INAQ16352 499 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 FAM174BQ3ZCQ3 159 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 PIGGQ5H8A4 983 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 SPANXN4Q5MJ08 99 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 METTL21CQ5VZV1 264 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 OR4F3Q6IEY1 312 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 CGB2Q6NT52 195 aa11.7□□□□□ -0.54
DDB1-207ENST00000535967 MSANTD1Q6ZTZ1 278 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms