RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 SEC22BO75396 215 aa3.55□□□□□ -1.84
PRKDC-205ENST00000535375 PDE5AO76074 875 aa3.55□□□□□ -1.84
PRKDC-205ENST00000535375 REC8O95072 547 aa3.55□□□□□ -1.84
PRKDC-205ENST00000535375 OAS1P00973 400 aaKnown RBP3.55□□□□□ -1.84
PRKDC-205ENST00000535375 SAA4P35542 130 aa3.55□□□□□ -1.84
PRKDC-205ENST00000535375 XCR1P46094 333 aa3.55□□□□□ -1.84
PRKDC-205ENST00000535375 VCPP55072 806 aaKnown RBP3.55□□□□□ -1.84
PRKDC-205ENST00000535375 EXOSC7Q15024 291 aaKnown RBP3.55□□□□□ -1.84
PRKDC-205ENST00000535375 GPAT3Q53EU6 434 aa3.55□□□□□ -1.84
PRKDC-205ENST00000535375 SLC22A10Q63ZE4 541 aa3.55□□□□□ -1.84
PRKDC-205ENST00000535375 LINC01006Q8NI28 216 aa3.55□□□□□ -1.84
PRKDC-205ENST00000535375 ST7LQ8TDW4 575 aa3.55□□□□□ -1.84
PRKDC-205ENST00000535375 TMEM237Q96Q45 408 aa3.55□□□□□ -1.84
PRKDC-205ENST00000535375 ANO10Q9NW15 660 aa3.55□□□□□ -1.84
PRKDC-205ENST00000535375 TRMT6Q9UJA5 497 aaKnown RBP3.55□□□□□ -1.84
PRKDC-205ENST00000535375 MOSPD1Q9UJG1 213 aa3.55□□□□□ -1.84
PRKDC-205ENST00000535375 CCPG1Q9ULG6 757 aa3.55□□□□□ -1.84
PRKDC-205ENST00000535375 MRPS2Q9Y399 296 aaKnown RBP3.55□□□□□ -1.84
PRKDC-205ENST00000535375 RNF115Q9Y4L5 304 aa3.55□□□□□ -1.84
PRKDC-205ENST00000535375 TNRQ92752 1358 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 C19orf81C9J6K1 198 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 G3V3Y1 287 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 EEF2KO00418 725 aaKnown RBP3.54□□□□□ -1.84
PRKDC-205ENST00000535375 TYROBPO43914 113 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 GSTA1P08263 222 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 SERPINF2P08697 491 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 IDSP22304 550 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 TRIM23P36406 574 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 STX17P56962 302 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 CD226Q15762 336 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 HIST2H2AA3Q6FI13 130 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 B3GLCTQ6Y288 498 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 UNC5CLQ8IV45 518 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 SERPINA12Q8IW75 414 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 GPR137CQ8N3F9 429 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 OR13F1Q8NGS4 319 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 RAB39BQ96DA2 213 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 CPXM1Q96SM3 734 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 PLSCR3Q9NRY6 295 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 CENPMQ9NSP4 180 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 TRIM10Q9UDY6 481 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 NTNG1Q9Y2I2 539 aa3.54□□□□□ -1.84
PRKDC-205ENST00000535375 ZFP92A6NM28 416 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 C11orf98E9PRG8 122 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 CXCL14O95715 111 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 ABHD2P08910 425 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 HIST1H2AGP0C0S8 130 aaPredicted RBP3.53□□□□□ -1.84
PRKDC-205ENST00000535375 GHRP10912 638 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 IL10P22301 178 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 PTPN4P29074 926 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 CASP9P55211 416 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 RIPK4P57078 832 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 IL1RL1Q01638 556 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 PDE7AQ13946 482 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 PAGE2BQ5JRK9 111 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 C1orf186Q6ZWK4 172 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 PRSS48Q7RTY5 328 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.53□□□□□ -1.84
PRKDC-205ENST00000535375 PYROXD2Q8N2H3 581 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 MRPL43Q8N983 215 aaKnown RBP3.53□□□□□ -1.84
PRKDC-205ENST00000535375 CCDC26Q8TAB7 109 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 RFESDQ8TAC1 157 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 HIST1H2ACQ93077 130 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 VSIG2Q96IQ7 327 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 ELOVL4Q9GZR5 314 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 FETUBQ9UGM5 382 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 TDRKHQ9Y2W6 561 aaKnown RBP3.53□□□□□ -1.84
PRKDC-205ENST00000535375 SYNJ2O15056 1496 aa3.53□□□□□ -1.84
PRKDC-205ENST00000535375 A0A0J9YVX5 310 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 TRBV2A0A0J9YWF9 115 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 SLC28A1O00337 649 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 RANBP6O60518 1105 aaKnown RBP3.52□□□□□ -1.85
PRKDC-205ENST00000535375 KRT6AP02538 564 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 KRT6BP04259 564 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 ELK1P19419 428 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 FCARP24071 287 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 NSFP46459 744 aaKnown RBP3.52□□□□□ -1.85
PRKDC-205ENST00000535375 KRT6CP48668 564 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 METAP1P53582 386 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 BNIP1Q12981 228 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 MSLNQ13421 630 aaPredicted RBP3.52□□□□□ -1.85
PRKDC-205ENST00000535375 ZIC1Q15915 447 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 ETFRF1Q6IPR1 90 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 CWC27Q6UX04 472 aaKnown RBP3.52□□□□□ -1.85
PRKDC-205ENST00000535375 ADAMTSL5Q6ZMM2 481 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 GET4Q7L5D6 327 aaPredicted RBP3.52□□□□□ -1.85
PRKDC-205ENST00000535375 CADM2Q8N3J6 435 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 OR52J3Q8NH60 311 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 ZNF564Q8TBZ8 553 aaPredicted RBP3.52□□□□□ -1.85
PRKDC-205ENST00000535375 URGCPQ8TCY9 931 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 FAM122AQ96E09 287 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 GPR137Q96N19 417 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 KIR2DL4Q99706 377 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 JPH2Q9BR39 696 aaPredicted RBP3.52□□□□□ -1.85
PRKDC-205ENST00000535375 FAM213AQ9BRX8 229 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 ABCG4Q9H172 646 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 TMEM245Q9H330 911 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 TSPY26PQ9H489 355 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 KCNMB3Q9NPA1 279 aa3.52□□□□□ -1.85
PRKDC-205ENST00000535375 MIEF1Q9NQG6 463 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms