RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 DUSP5Q16690 384 aa22.2■■□□□ 1.15
PTPMT1-205ENST00000534775 RFX4Q33E94 735 aa22.2■■□□□ 1.15
PTPMT1-205ENST00000534775 SLC36A3Q495N2 470 aa22.2■■□□□ 1.15
PTPMT1-205ENST00000534775 CYP27C1Q4G0S4 372 aa22.2■■□□□ 1.15
PTPMT1-205ENST00000534775 CARM1Q86X55 608 aa22.2■■□□□ 1.15
PTPMT1-205ENST00000534775 HS3ST5Q8IZT8 346 aa22.2■■□□□ 1.15
PTPMT1-205ENST00000534775 SIMC1Q8NDZ2 872 aa22.2■■□□□ 1.15
PTPMT1-205ENST00000534775 APOBEC4Q8WW27 367 aaKnown RBP22.2■■□□□ 1.15
PTPMT1-205ENST00000534775 PIP5K1AQ99755 562 aa22.2■■□□□ 1.15
PTPMT1-205ENST00000534775 AMBRA1Q9C0C7 1298 aa22.2■■□□□ 1.15
PTPMT1-205ENST00000534775 SLC38A1Q9H2H9 487 aa22.2■■□□□ 1.15
PTPMT1-205ENST00000534775 SMOC1Q9H4F8 434 aa22.2■■□□□ 1.15
PTPMT1-205ENST00000534775 CACYBPQ9HB71 228 aaKnown RBP22.2■■□□□ 1.15
PTPMT1-205ENST00000534775 SATB2Q9UPW6 733 aa22.2■■□□□ 1.15
PTPMT1-205ENST00000534775 PRAMEF25A6NGN4 478 aa22.2■■□□□ 1.14
PTPMT1-205ENST00000534775 H0YAE9 185 aa22.2■■□□□ 1.14
PTPMT1-205ENST00000534775 SNAP29O95721 258 aa22.2■■□□□ 1.14
PTPMT1-205ENST00000534775 CBX7O95931 251 aa22.2■■□□□ 1.14
PTPMT1-205ENST00000534775 AK1P00568 194 aa22.2■■□□□ 1.14
PTPMT1-205ENST00000534775 ALPPP05187 535 aa22.2■■□□□ 1.14
PTPMT1-205ENST00000534775 UBTFL6P0CB48 400 aaPredicted RBP22.2■■□□□ 1.14
PTPMT1-205ENST00000534775 MAOAP21397 527 aa22.2■■□□□ 1.14
PTPMT1-205ENST00000534775 CHN2P52757 468 aa22.2■■□□□ 1.14
PTPMT1-205ENST00000534775 EXOSC7Q15024 291 aaKnown RBP22.2■■□□□ 1.14
PTPMT1-205ENST00000534775 WDR53Q7Z5U6 358 aaPredicted RBP22.2■■□□□ 1.14
PTPMT1-205ENST00000534775 OR52R1Q8NGF1 315 aa22.2■■□□□ 1.14
PTPMT1-205ENST00000534775 CYGBQ8WWM9 190 aa22.2■■□□□ 1.14
PTPMT1-205ENST00000534775 PINK1Q9BXM7 581 aa22.2■■□□□ 1.14
PTPMT1-205ENST00000534775 SLC7A5P2Q9GIP4 190 aa22.2■■□□□ 1.14
PTPMT1-205ENST00000534775 SMURF2Q9HAU4 748 aa22.2■■□□□ 1.14
PTPMT1-205ENST00000534775 LANCL2Q9NS86 450 aa22.2■■□□□ 1.14
PTPMT1-205ENST00000534775 TESMINQ9Y4I5 508 aa22.2■■□□□ 1.14
PTPMT1-205ENST00000534775 LAMA1P25391 3075 aa22.19■■□□□ 1.14
PTPMT1-205ENST00000534775 NUP210LQ5VU65 1888 aa22.19■■□□□ 1.14
PTPMT1-205ENST00000534775 TNFRSF11BO00300 401 aa22.19■■□□□ 1.14
PTPMT1-205ENST00000534775 HS6ST1O60243 411 aa22.19■■□□□ 1.14
PTPMT1-205ENST00000534775 LYNP07948 512 aa22.19■■□□□ 1.14
PTPMT1-205ENST00000534775 RAD23AP54725 363 aa22.19■■□□□ 1.14
PTPMT1-205ENST00000534775 SPIBQ01892 262 aa22.19■■□□□ 1.14
PTPMT1-205ENST00000534775 ARHGAP40Q5TG30 622 aa22.19■■□□□ 1.14
PTPMT1-205ENST00000534775 MLIPQ5VWP3 458 aa22.19■■□□□ 1.14
PTPMT1-205ENST00000534775 UGT2A3Q6UWM9 527 aa22.19■■□□□ 1.14
PTPMT1-205ENST00000534775 DGAT2L6Q6ZPD8 337 aa22.19■■□□□ 1.14
PTPMT1-205ENST00000534775 CYP4Z1Q86W10 505 aa22.19■■□□□ 1.14
PTPMT1-205ENST00000534775 CHDHQ8NE62 594 aaPredicted RBP22.19■■□□□ 1.14
PTPMT1-205ENST00000534775 DOK4Q8TEW6 326 aa22.19■■□□□ 1.14
PTPMT1-205ENST00000534775 PDP1Q9P0J1 537 aaPredicted RBP22.19■■□□□ 1.14
PTPMT1-205ENST00000534775 C3orf18Q9UK00 162 aa22.19■■□□□ 1.14
PTPMT1-205ENST00000534775 SLC9A8Q9Y2E8 581 aa22.19■■□□□ 1.14
PTPMT1-205ENST00000534775 CLDN16Q9Y5I7 305 aa22.19■■□□□ 1.14
PTPMT1-205ENST00000534775 NME6O75414 186 aaPredicted RBP22.18■■□□□ 1.14
PTPMT1-205ENST00000534775 RECKO95980 971 aa22.18■■□□□ 1.14
PTPMT1-205ENST00000534775 CHRNEQ04844 493 aa22.18■■□□□ 1.14
PTPMT1-205ENST00000534775 ZNF155Q12901 538 aaPredicted RBP22.18■■□□□ 1.14
PTPMT1-205ENST00000534775 PUM1Q14671 1186 aaKnown RBP eCLIP22.18■■□□□ 1.14
PTPMT1-205ENST00000534775 ZNHIT3Q15649 155 aaPredicted RBP22.18■■□□□ 1.14
PTPMT1-205ENST00000534775 PRAMEF17Q5VTA0 474 aa22.18■■□□□ 1.14
PTPMT1-205ENST00000534775 KRT80Q6KB66 452 aa22.18■■□□□ 1.14
PTPMT1-205ENST00000534775 PRR23CQ6ZRP0 262 aa22.18■■□□□ 1.14
PTPMT1-205ENST00000534775 QSOX2Q6ZRP7 698 aa22.18■■□□□ 1.14
PTPMT1-205ENST00000534775 COX18Q8N8Q8 333 aa22.18■■□□□ 1.14
PTPMT1-205ENST00000534775 RCBTB1Q8NDN9 531 aa22.18■■□□□ 1.14
PTPMT1-205ENST00000534775 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.18■■□□□ 1.14
PTPMT1-205ENST00000534775 PTCHD1Q96NR3 888 aa22.18■■□□□ 1.14
PTPMT1-205ENST00000534775 OR6C1Q96RD1 312 aa22.18■■□□□ 1.14
PTPMT1-205ENST00000534775 MTHFD2LQ9H903 347 aaPredicted RBP22.18■■□□□ 1.14
PTPMT1-205ENST00000534775 UBAP1Q9NZ09 502 aa22.18■■□□□ 1.14
PTPMT1-205ENST00000534775 RARRES3Q9UL19 164 aa22.18■■□□□ 1.14
PTPMT1-205ENST00000534775 LYVE1Q9Y5Y7 322 aa22.18■■□□□ 1.14
PTPMT1-205ENST00000534775 JRKO75564 520 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 LDOC1O95751 146 aaPredicted RBP22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 IFNA16P05015 189 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 PABPC4LP0CB38 370 aaKnown RBP22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 S1PR1P21453 382 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 PRKACGP22612 351 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 MAP3K8P41279 467 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 PDX1P52945 283 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 TRA2AQ13595 282 aaKnown RBP eCLIP22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 PLA2G2CQ5R387 149 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 RHBDD2Q6NTF9 364 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 HOXB13Q92826 284 aaPredicted RBP22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 CNDP2Q96KP4 475 aaKnown RBP22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 MKKSQ9NPJ1 570 aaPredicted RBP22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 NECTIN3Q9NQS3 549 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 KIF17Q9P2E2 1029 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 SCOCQ9UIL1 159 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 IFT52Q9Y366 437 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 WDR45Q9Y484 360 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 CCDC88CQ9P219 2028 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 SYT5O00445 386 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 NTN3O00634 580 aaPredicted RBP22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 FLRT2O43155 660 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 GALR2O43603 387 aaPredicted RBP22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 PRAMEF2O60811 474 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 MYF6P23409 242 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 ADARB1P78563 741 aaKnown RBP22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 ZNF311Q5JNZ3 666 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 PHF19Q5T6S3 580 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 MFSD4BQ5TF39 518 aa22.17■■□□□ 1.14
PTPMT1-205ENST00000534775 TCEAL6Q6IPX3 200 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms