RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	DNAJC15	Q9Y5T4	150 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PEX14	O75381	377 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CDRT1	O95170	752 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TCN2	P20062	427 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ZNF140	P52738	457 aa	Predicted RBP	14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CEBPG	P53567	150 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	GALNT1	Q10472	559 aa	Predicted RBP	14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	OR2A12	Q8NGT7	310 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	NEIL2	Q969S2	332 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	APIP	Q96GX9	242 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532		H3BML4	177 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SULT2B1	O00204	365 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ANXA3	P12429	323 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ETFA	P13804	333 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ACTA2	P62736	377 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ACTG2	P63267	376 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ADAM15	Q13444	863 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TMEM184A	Q6ZMB5	413 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	UTS2B	Q765I0	119 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	LAS2	Q8IYD9	372 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TEX26	Q8N6G2	289 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	DPH2	Q9BQC3	489 aa	Predicted RBP	14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ADAM18	Q9Y3Q7	739 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PTGDR2	Q9Y5Y4	395 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	DDC	P20711	480 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CTXN1	P60606	82 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	DUSP6	Q16828	381 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SLC18B1	Q6NT16	456 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SNX29P2	Q8IUI4	249 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CLECL1	Q8IZS7	167 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	FER1L6-AS2	Q96M78	137 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	KCND3	Q9UK17	655 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TRBV11-1	A0A0K0K1C0	115 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PVR	P15151	417 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	APLNR	P35414	380 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	HK3	P52790	923 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	BEND4	Q6ZU67	534 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SSX6	Q7RTT6	188 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	INO80E	Q8NBZ0	244 aa	Predicted RBP	14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SECISBP2	Q96T21	854 aa	Known RBP	14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	RNF215	Q9Y6U7	377 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	C17orf113	A0A1B0GUU1	675 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ABLIM3	O94929	683 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PSKH1	P11801	424 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CD27	P26842	260 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	POU3F4	P49335	361 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SH3BP2	P78314	561 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	EEF1A2	Q05639	463 aa	Known RBP	14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	HSD17B12	Q53GQ0	312 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ZNF613	Q6PF04	617 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PRR22	Q8IZ63	422 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	OR9A2	Q8NGT5	310 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	MYLIP	Q8WY64	445 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	HPS1	Q92902	700 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SLC39A13	Q96H72	371 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	KATNBL1	Q9H079	304 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	R3HDML	Q9H3Y0	253 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	GPR160	Q9UJ42	338 aa		14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	NXT1	Q9UKK6	140 aa	Known RBP	14.91	□□□□□ -0.02
NCAPD3-213	ENST00000534532	LOC102723532	A0A0G2JNH3	316 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TOR1B	O14657	336 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SIGLEC6	O43699	453 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	BMP4	P12644	408 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TRA2B	P62995	288 aa	Known RBP	14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	COL9A2	Q14055	689 aa	Predicted RBP	14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SLC25A25	Q6KCM7	469 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PIANP	Q8IYJ0	282 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CNN2	Q99439	309 aa	Known RBP	14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	HDAC8	Q9BY41	377 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	C5AR2	Q9P296	337 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CCL26	Q9Y258	94 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532		A0A0U1RQS6	177 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	LOC285095	A0A1B0GVY8	99 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PENK	P01210	267 aa	Predicted RBP	14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	MC3R	P41968	323 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	DCAF7	P61962	342 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SPTSSA	Q969W0	71 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TBC1D20	Q96BZ9	403 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ZNF317	Q96PQ6	595 aa	Predicted RBP	14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TAS2R10	Q9NYW0	307 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	KCNIP1	Q9NZI2	227 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	EMC3	Q9P0I2	261 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	LHX3	Q9UBR4	397 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	KCNS2	Q9ULS6	477 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	VDAC3	Q9Y277	283 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PLOD2	O00469	737 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SCGB1D2	O95969	90 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	EIF2D	P41214	584 aa	Known RBP	14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	FASLG	P48023	281 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PGGT1B	P53609	377 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TUBA1B	P68363	451 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TUBA4A	P68366	448 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TAP2	Q03519	686 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ATP6AP1	Q15904	470 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	COQ5	Q5HYK3	327 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TUBA1A	Q71U36	451 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ZNF619	Q8N2I2	560 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ARRDC3	Q96B67	414 aa		14.9	□□□□□ -0.02

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms