RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	RNF115	Q9Y4L5	304 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	TNS3	Q68CZ2	1445 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	C10orf71	Q711Q0	1435 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	ANKAR	Q7Z5J8	1434 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	PXDNL	A1KZ92	1463 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	RGPD8	O14715	1765 aa	Predicted RBP	4.13	□□□□□ -1.75
ATM-223	ENST00000533979		A0A075B6Q4	140 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979		A0A0G2JLW4	131 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	LINC00854	A0A1B0GVQ3	168 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	PPIAL4D	F5H284	164 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	LRRTM2	O43300	516 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	WDR1	O75083	606 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	BCAS1	O75363	584 aa	Predicted RBP	4.13	□□□□□ -1.75
ATM-223	ENST00000533979	TM7SF2	O76062	418 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	NDUFA7	O95182	113 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	TXNDC12	O95881	172 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	GOT2	P00505	430 aa	Known RBP	4.13	□□□□□ -1.75
ATM-223	ENST00000533979	AGT	P01019	485 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	CHRNA1	P02708	482 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	CSF2	P04141	144 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	TFAP2A	P05549	437 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	4.13	□□□□□ -1.75
ATM-223	ENST00000533979	FAM106CP	P0CH98	169 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	MYOD1	P15172	320 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	ALDH1B1	P30837	517 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	USP8	P40818	1118 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	GRIA1	P42261	906 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	OR1G1	P47890	313 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	HILS1	P60008	231 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	RPS8	P62241	208 aa	Known RBP	4.13	□□□□□ -1.75
ATM-223	ENST00000533979	EXOC3L2	Q2M3D2	409 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	DCAF4L1	Q3SXM0	396 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	CEP85L	Q5SZL2	805 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	LIPJ	Q5W064	366 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	AP1AR	Q63HQ0	302 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	ZNF776	Q68DI1	518 aa	Predicted RBP	4.13	□□□□□ -1.75
ATM-223	ENST00000533979	PYHIN1	Q6K0P9	492 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	TRIM65	Q6PJ69	517 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	C19orf48	Q6RUI8	117 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	COX8C	Q7Z4L0	72 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	NFE4	Q86UQ8	179 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	SERINC5	Q86VE9	423 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	4.13	□□□□□ -1.75
ATM-223	ENST00000533979	LRRC75A-AS1	Q8N1F1	130 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	PDCL2	Q8N4E4	241 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	LRTM2	Q8N967	370 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	DMBX1	Q8NFW5	382 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	TRMT10A	Q8TBZ6	339 aa	Known RBP	4.13	□□□□□ -1.75
ATM-223	ENST00000533979	HIST1H2AC	Q93077	130 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	FBXO17	Q96EF6	278 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	SENP5	Q96HI0	755 aa	Predicted RBP	4.13	□□□□□ -1.75
ATM-223	ENST00000533979	NPY6R	Q99463	290 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	SLC39A3	Q9BRY0	314 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	MTG1	Q9BT17	334 aa	Predicted RBP	4.13	□□□□□ -1.75
ATM-223	ENST00000533979	TRAF4	Q9BUZ4	470 aa	Predicted RBP	4.13	□□□□□ -1.75
ATM-223	ENST00000533979	RBM24	Q9BX46	236 aa	Known RBP	4.13	□□□□□ -1.75
ATM-223	ENST00000533979	DPEP2	Q9H4A9	486 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.13	□□□□□ -1.75
ATM-223	ENST00000533979	SLC52A3	Q9NQ40	469 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	AGPAT5	Q9NUQ2	364 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	SLC38A7	Q9NVC3	462 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	LHX3	Q9UBR4	397 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	MRTO4	Q9UKD2	239 aa	Known RBP	4.13	□□□□□ -1.75
ATM-223	ENST00000533979	RALY	Q9UKM9	306 aa	Known RBP	4.13	□□□□□ -1.75
ATM-223	ENST00000533979	NCKAP1	Q9Y2A7	1128 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	OR10H1	Q9Y4A9	318 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	ETV7	Q9Y603	341 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	SLCO1B1	Q9Y6L6	691 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	TOPAZ1	Q8N9V7	1692 aa		4.13	□□□□□ -1.75
ATM-223	ENST00000533979	ABCA3	Q99758	1704 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979		A0A0G2JNG1	304 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	FAM240B	A0A1B0GVZ2	78 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	SERINC4	A6NH21	518 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979		E9PMD0	336 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	FAM72C	H0Y354	149 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	SGK494	L7N484	410 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	KLF11	O14901	512 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	NEBL	O76041	1014 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	GSTA2	P09210	222 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	GP1BB	P13224	206 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	EZR	P15311	586 aa	Known RBP	4.12	□□□□□ -1.75
ATM-223	ENST00000533979	ZNF44	P15621	663 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	TIMP3	P35625	211 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	ALDH3B1	P43353	468 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	ISL1	P61371	349 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	NFATC2	Q13469	925 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	GPR50	Q13585	617 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	KIR2DS5	Q14953	304 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	OPCML	Q14982	345 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	SYCP1	Q15431	976 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	BCL7A	Q4VC05	210 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	MPPE1	Q53F39	396 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	CCDC122	Q5T0U0	273 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	FAM72A	Q5TYM5	149 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	ATF7IP2	Q5U623	682 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	SNRNP48	Q6IEG0	339 aa	Known RBP	4.12	□□□□□ -1.75
ATM-223	ENST00000533979	FAM72D	Q6L9T8	149 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	CAPN13	Q6MZZ7	669 aa	Predicted RBP	4.12	□□□□□ -1.75
ATM-223	ENST00000533979	BLOC1S2	Q6QNY1	142 aa		4.12	□□□□□ -1.75
ATM-223	ENST00000533979	CDR2L	Q86X02	465 aa	Predicted RBP	4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms