RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ACAD8Q9UKU7 415 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 GRID1Q9ULK0 1009 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 MAPRE3Q9UPY8 281 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 GPR55Q9Y2T6 319 aaPredicted RBP8.8□□□□□ -1
SSBP3-215ENST00000533946 DNAJC15Q9Y5T4 150 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 MED12LQ86YW9 2145 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 DOCK7Q96N67 2140 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 MPDZO75970 2070 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 SERTM1A2A2V5 107 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 SHISA8B8ZZ34 492 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 NPIPB8E9PQR5 432 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 H0YC42 278 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 CDK2AP1O14519 115 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 AQP7O14520 342 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 HNRNPRO43390 633 aaKnown RBP8.79□□□□□ -1
SSBP3-215ENST00000533946 TSPAN2O60636 221 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 TRAPPC6AO75865 159 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 MLYCDO95822 493 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 ENO1P06733 434 aaKnown RBP8.79□□□□□ -1
SSBP3-215ENST00000533946 HSD3B1P14060 373 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 HSD3B2P26439 372 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 ACVR2AP27037 513 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 GDF1P27539 372 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 PTPN6P29350 595 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 MAN2A2P49641 1150 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 CDK9P50750 372 aaKnown RBP8.79□□□□□ -1
SSBP3-215ENST00000533946 GAS1P54826 345 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 CASP6P55212 293 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 TPD52P55327 224 aaPredicted RBP8.79□□□□□ -1
SSBP3-215ENST00000533946 PSG6Q00889 435 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 CRYZQ08257 329 aaKnown RBP8.79□□□□□ -1
SSBP3-215ENST00000533946 CEBPEQ15744 281 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 ARL13AQ5H913 290 aaPredicted RBP8.79□□□□□ -1
SSBP3-215ENST00000533946 ANGPTL8Q6UXH0 198 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 APOOLQ6UXV4 268 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 SLC15A4Q8N697 577 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 EIF1ADQ8N9N8 165 aaKnown RBP8.79□□□□□ -1
SSBP3-215ENST00000533946 TNIP2Q8NFZ5 429 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 OR7G1Q8NGA0 311 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 OR5M1Q8NGP8 315 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 FBXO30Q8TB52 745 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 TCP10LQ8TDR4 215 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 TP53INP1Q96A56 240 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 LCORQ96JN0 433 aaPredicted RBP8.79□□□□□ -1
SSBP3-215ENST00000533946 ART5Q96L15 291 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 TSSK3Q96PN8 268 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 ADOQ96SZ5 270 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 TIMP4Q99727 224 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 PELOQ9BRX2 385 aaKnown RBP8.79□□□□□ -1
SSBP3-215ENST00000533946 G6PC3Q9BUM1 346 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 PARD6BQ9BYG5 372 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 LDAHQ9H6V9 325 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 LGALS13Q9UHV8 139 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 ZDHHC2Q9UIJ5 367 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 C15orf41Q9Y2V0 281 aa8.79□□□□□ -1
SSBP3-215ENST00000533946 KLF2Q9Y5W3 355 aaPredicted RBP8.79□□□□□ -1
SSBP3-215ENST00000533946 ANKRD17O75179 2603 aaKnown RBP8.79□□□□□ -1
SSBP3-215ENST00000533946 WDR91A4D1P6 747 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 UPK1AO00322 258 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 AZIN1O14977 448 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 PIP5K1BO14986 540 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 GMFGO60234 142 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 SEC22BO75396 215 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 RSL1D1O76021 490 aaKnown RBP8.78□□□□□ -1
SSBP3-215ENST00000533946 NUDT17P0C025 328 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 CYP4B1P13584 511 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 IGFBP2P18065 325 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 BMP7P18075 431 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 SDC1P18827 310 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 DDCP20711 480 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 PPICP45877 212 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 CCT5P48643 541 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 NCBP2P52298 156 aaKnown RBP eCLIP8.78□□□□□ -1
SSBP3-215ENST00000533946 SMSP52788 366 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 TRA2BP62995 288 aaKnown RBP8.78□□□□□ -1
SSBP3-215ENST00000533946 ZNF844Q08AG5 666 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 BIKQ13323 160 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 GAB1Q13480 694 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 SH2D4BQ5SQS7 431 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 LIPMQ5VYY2 423 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 HLA-DQA1Q5Y7H0 255 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 KANK2Q63ZY3 851 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 MEX3BQ6ZN04 569 aaKnown RBP8.78□□□□□ -1
SSBP3-215ENST00000533946 OLIG3Q7RTU3 272 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 LCA5Q86VQ0 697 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 SLC44A2Q8IWA5 706 aaPredicted RBP8.78□□□□□ -1
SSBP3-215ENST00000533946 ULK2Q8IYT8 1036 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 TAGAPQ8N103 731 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 KRTCAP2Q8N6L1 136 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 GBP7Q8N8V2 638 aaPredicted RBP8.78□□□□□ -1
SSBP3-215ENST00000533946 RELL2Q8NC24 303 aaPredicted RBP8.78□□□□□ -1
SSBP3-215ENST00000533946 FAM83FQ8NEG4 500 aaPredicted RBP8.78□□□□□ -1
SSBP3-215ENST00000533946 OR10Q1Q8NGQ4 319 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 OR6Y1Q8NGX8 325 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 LILRB4Q8NHJ6 448 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 NEIL3Q8TAT5 605 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 ZNF675Q8TD23 568 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 PHF10Q8WUB8 498 aaKnown RBP8.78□□□□□ -1
SSBP3-215ENST00000533946 PIK3R3Q92569 461 aa8.78□□□□□ -1
SSBP3-215ENST00000533946 ZNF524Q96C55 264 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms