RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 ABCD3P28288 659 aa19.33■□□□□ 0.68
VPS51-211ENST00000533487 MLLT10P55197 1068 aa19.33■□□□□ 0.68
VPS51-211ENST00000533487 FOXK1P85037 733 aa19.33■□□□□ 0.68
VPS51-211ENST00000533487 BNC2Q6ZN30 1099 aaPredicted RBP19.33■□□□□ 0.68
VPS51-211ENST00000533487 NUP54Q7Z3B4 507 aa19.33■□□□□ 0.68
VPS51-211ENST00000533487 SLC34A3Q8N130 599 aa19.33■□□□□ 0.68
VPS51-211ENST00000533487 CDRT4Q8N9R6 151 aa19.33■□□□□ 0.68
VPS51-211ENST00000533487 OR56A1Q8NGH5 318 aa19.33■□□□□ 0.68
VPS51-211ENST00000533487 HOXB13Q92826 284 aaPredicted RBP19.33■□□□□ 0.68
VPS51-211ENST00000533487 LMF2Q9BU23 707 aaKnown RBP19.33■□□□□ 0.68
VPS51-211ENST00000533487 SH2D2AQ9NP31 389 aa19.33■□□□□ 0.68
VPS51-211ENST00000533487 GIN1Q9NXP7 522 aa19.33■□□□□ 0.68
VPS51-211ENST00000533487 LUZP4Q9P127 313 aa19.33■□□□□ 0.68
VPS51-211ENST00000533487 ZNF462Q96JM2 2506 aa19.33■□□□□ 0.68
VPS51-211ENST00000533487 ZNF354AO60765 605 aaPredicted RBP19.32■□□□□ 0.68
VPS51-211ENST00000533487 PPM1BO75688 479 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 IL6P05231 212 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 KRT16P08779 473 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 CT45A8P0DMV1 189 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 CT45A9P0DMV2 189 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 CNR1P21554 472 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 S100A3P33764 101 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 IDH3AP50213 366 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 AQP5P55064 265 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 PGS1Q32NB8 556 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 CT45A2Q5DJT8 189 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 GK5Q6ZS86 529 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 FBXW8Q8N3Y1 598 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 ZFP62Q8NB50 900 aaPredicted RBP19.32■□□□□ 0.68
VPS51-211ENST00000533487 GRHL3Q8TE85 626 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 OR52B2Q96RD2 323 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 Q9N2J8 555 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 KLHL1Q9NR64 748 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 OLAHQ9NV23 265 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 ASF1BQ9NVP2 202 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 DTX4Q9Y2E6 619 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 SHANK1Q9Y566 2161 aa19.32■□□□□ 0.68
VPS51-211ENST00000533487 OR6C70A6NIJ9 312 aa19.31■□□□□ 0.68
VPS51-211ENST00000533487 J3QKU1 62 aa19.31■□□□□ 0.68
VPS51-211ENST00000533487 SLC22A3O75751 556 aa19.31■□□□□ 0.68
VPS51-211ENST00000533487 EDN3P14138 238 aa19.31■□□□□ 0.68
VPS51-211ENST00000533487 PTGER1P34995 402 aa19.31■□□□□ 0.68
VPS51-211ENST00000533487 KRT20P35900 424 aa19.31■□□□□ 0.68
VPS51-211ENST00000533487 MDH1P40925 334 aaKnown RBP19.31■□□□□ 0.68
VPS51-211ENST00000533487 PRIM2P49643 509 aa19.31■□□□□ 0.68
VPS51-211ENST00000533487 PSMD4P55036 377 aaKnown RBP19.31■□□□□ 0.68
VPS51-211ENST00000533487 STX1BP61266 288 aa19.31■□□□□ 0.68
VPS51-211ENST00000533487 PLCXD2Q0VAA5 305 aa19.31■□□□□ 0.68
VPS51-211ENST00000533487 ZNF155Q12901 538 aaPredicted RBP19.31■□□□□ 0.68
VPS51-211ENST00000533487 SNTA1Q13424 505 aa19.31■□□□□ 0.68
VPS51-211ENST00000533487 EFR3AQ14156 821 aa19.31■□□□□ 0.68
VPS51-211ENST00000533487 ZNF324BQ6AW86 544 aaPredicted RBP19.31■□□□□ 0.68
VPS51-211ENST00000533487 MSANTD1Q6ZTZ1 278 aa19.31■□□□□ 0.68
VPS51-211ENST00000533487 MDGA2Q7Z553 956 aa19.31■□□□□ 0.68
VPS51-211ENST00000533487 MIER2Q8N344 545 aa19.31■□□□□ 0.68
VPS51-211ENST00000533487 NUP43Q8NFH3 380 aa19.31■□□□□ 0.68
VPS51-211ENST00000533487 NR4A3Q92570 626 aa19.31■□□□□ 0.68
VPS51-211ENST00000533487 SLC35A4Q96G79 324 aa19.31■□□□□ 0.68
VPS51-211ENST00000533487 FAM173AQ9BQD7 235 aa19.31■□□□□ 0.68
VPS51-211ENST00000533487 BTNL2Q9UIR0 455 aa19.31■□□□□ 0.68
VPS51-211ENST00000533487 PEX1O43933 1283 aa19.3■□□□□ 0.68
VPS51-211ENST00000533487 TROVE2P10155 538 aaKnown RBP eCLIP19.3■□□□□ 0.68
VPS51-211ENST00000533487 CDK9P50750 372 aaKnown RBP19.3■□□□□ 0.68
VPS51-211ENST00000533487 ATP4BP51164 291 aa19.3■□□□□ 0.68
VPS51-211ENST00000533487 PNLIPRP2P54317 469 aa19.3■□□□□ 0.68
VPS51-211ENST00000533487 PSG6Q00889 435 aa19.3■□□□□ 0.68
VPS51-211ENST00000533487 KRTCAP3Q53RY4 240 aa19.3■□□□□ 0.68
VPS51-211ENST00000533487 SULF2Q8IWU5 870 aa19.3■□□□□ 0.68
VPS51-211ENST00000533487 SIMC1Q8NDZ2 872 aa19.3■□□□□ 0.68
VPS51-211ENST00000533487 FAM13CQ8NE31 585 aa19.3■□□□□ 0.68
VPS51-211ENST00000533487 TMCO6Q96DC7 493 aa19.3■□□□□ 0.68
VPS51-211ENST00000533487 OMA1Q96E52 524 aa19.3■□□□□ 0.68
VPS51-211ENST00000533487 FAM120BQ96EK7 910 aaKnown RBP19.3■□□□□ 0.68
VPS51-211ENST00000533487 FRMD6Q96NE9 622 aa19.3■□□□□ 0.68
VPS51-211ENST00000533487 TAAR6Q96RI8 345 aa19.3■□□□□ 0.68
VPS51-211ENST00000533487 SLX1AQ9BQ83 275 aa19.3■□□□□ 0.68
VPS51-211ENST00000533487 RABEP2Q9H5N1 569 aa19.3■□□□□ 0.68
VPS51-211ENST00000533487 HHATLQ9HCP6 504 aa19.3■□□□□ 0.68
VPS51-211ENST00000533487 SIRT3Q9NTG7 399 aaPredicted RBP19.3■□□□□ 0.68
VPS51-211ENST00000533487 ZCCHC3Q9NUD5 404 aaKnown RBP19.3■□□□□ 0.68
VPS51-211ENST00000533487 MAP10Q9P2G4 905 aa19.3■□□□□ 0.68
VPS51-211ENST00000533487 VPS4AQ9UN37 437 aa19.3■□□□□ 0.68
VPS51-211ENST00000533487 TRIM33Q9UPN9 1127 aa19.3■□□□□ 0.68
VPS51-211ENST00000533487 OR10H1Q9Y4A9 318 aa19.3■□□□□ 0.68
VPS51-211ENST00000533487 CHCHD2Q9Y6H1 151 aaPredicted RBP19.3■□□□□ 0.68
VPS51-211ENST00000533487 NUP214P35658 2090 aaPredicted RBP19.29■□□□□ 0.68
VPS51-211ENST00000533487 CFLARO15519 480 aa19.29■□□□□ 0.68
VPS51-211ENST00000533487 SCN2BO60939 215 aa19.29■□□□□ 0.68
VPS51-211ENST00000533487 SNX4O95219 450 aa19.29■□□□□ 0.68
VPS51-211ENST00000533487 C6orf47O95873 294 aa19.29■□□□□ 0.68
VPS51-211ENST00000533487 PGRP06401 933 aa19.29■□□□□ 0.68
VPS51-211ENST00000533487 ABCB1P08183 1280 aaPredicted RBP19.29■□□□□ 0.68
VPS51-211ENST00000533487 LCN1P31025 176 aa19.29■□□□□ 0.68
VPS51-211ENST00000533487 MAP3K8P41279 467 aa19.29■□□□□ 0.68
VPS51-211ENST00000533487 CCT3P49368 545 aaKnown RBP19.29■□□□□ 0.68
VPS51-211ENST00000533487 WNT3P56703 355 aa19.29■□□□□ 0.68
VPS51-211ENST00000533487 UFM1P61960 85 aa19.29■□□□□ 0.68
VPS51-211ENST00000533487 TXNL4AP83876 142 aaKnown RBP19.29■□□□□ 0.68
VPS51-211ENST00000533487 DECR1Q16698 335 aa19.29■□□□□ 0.68
VPS51-211ENST00000533487 FAM174BQ3ZCQ3 159 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms