RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 CPMP14384 443 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 MAGEA2P43356 314 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 VLDLRP98155 873 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 STX4Q12846 297 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 NHSL2Q5HYW2 709 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 TMEM164Q5U3C3 297 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 MLIPQ5VWP3 458 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 TMEM107Q6UX40 140 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 TMEM151BQ8IW70 566 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 HS3ST5Q8IZT8 346 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 CACTIN-AS1Q8N1I8 211 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 LRRC25Q8N386 305 aaPredicted RBP17.27■□□□□ 0.36
SMPD1-208ENST00000533123 PACRGLQ8N7B6 248 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 ZFP28Q8NHY6 868 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 STT3BQ8TCJ2 826 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 MAGEE2Q8TD90 523 aaPredicted RBP17.27■□□□□ 0.36
SMPD1-208ENST00000533123 TAMM41Q96BW9 452 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 OTUB1Q96FW1 271 aaPredicted RBP17.27■□□□□ 0.36
SMPD1-208ENST00000533123 ANKRA2Q9H9E1 313 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 FOXJ2Q9P0K8 574 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 CLDN16Q9Y5I7 305 aa17.27■□□□□ 0.36
SMPD1-208ENST00000533123 GNGT2O14610 69 aa17.27■□□□□ 0.35
SMPD1-208ENST00000533123 DIRAS1O95057 198 aa17.27■□□□□ 0.35
SMPD1-208ENST00000533123 PORP16435 677 aaPredicted RBP17.27■□□□□ 0.35
SMPD1-208ENST00000533123 AGXTP21549 392 aa17.27■□□□□ 0.35
SMPD1-208ENST00000533123 EFNA3P52797 238 aa17.27■□□□□ 0.35
SMPD1-208ENST00000533123 HSD17B7P56937 341 aa17.27■□□□□ 0.35
SMPD1-208ENST00000533123 RBBP4Q09028 425 aa17.27■□□□□ 0.35
SMPD1-208ENST00000533123 DYNC1I2Q13409 638 aaKnown RBP17.27■□□□□ 0.35
SMPD1-208ENST00000533123 LTB4RQ15722 352 aa17.27■□□□□ 0.35
SMPD1-208ENST00000533123 ZNF630Q2M218 657 aaPredicted RBP17.27■□□□□ 0.35
SMPD1-208ENST00000533123 RPS26P11Q5JNZ5 115 aaPredicted RBP17.27■□□□□ 0.35
SMPD1-208ENST00000533123 OVCH1Q7RTY7 1134 aa17.27■□□□□ 0.35
SMPD1-208ENST00000533123 OR9A2Q8NGT5 310 aa17.27■□□□□ 0.35
SMPD1-208ENST00000533123 MR1Q95460 341 aa17.27■□□□□ 0.35
SMPD1-208ENST00000533123 LRFN5Q96NI6 719 aa17.27■□□□□ 0.35
SMPD1-208ENST00000533123 PTCHD1Q96NR3 888 aa17.27■□□□□ 0.35
SMPD1-208ENST00000533123 Q9H521 79 aa17.27■□□□□ 0.35
SMPD1-208ENST00000533123 IL1RAPQ9NPH3 570 aa17.27■□□□□ 0.35
SMPD1-208ENST00000533123 VNN3Q9NY84 501 aa17.27■□□□□ 0.35
SMPD1-208ENST00000533123 PCDHGA3Q9Y5H0 932 aa17.27■□□□□ 0.35
SMPD1-208ENST00000533123 CELSR3Q9NYQ7 3312 aa17.26■□□□□ 0.35
SMPD1-208ENST00000533123 BLACEA4D250 179 aa17.26■□□□□ 0.35
SMPD1-208ENST00000533123 SUV39H1O43463 412 aa17.26■□□□□ 0.35
SMPD1-208ENST00000533123 ONECUT2O95948 504 aa17.26■□□□□ 0.35
SMPD1-208ENST00000533123 PRKAG1P54619 331 aa17.26■□□□□ 0.35
SMPD1-208ENST00000533123 OCA2Q04671 838 aa17.26■□□□□ 0.35
SMPD1-208ENST00000533123 TMEM179BQ7Z7N9 219 aa17.26■□□□□ 0.35
SMPD1-208ENST00000533123 SLC44A2Q8IWA5 706 aaPredicted RBP17.26■□□□□ 0.35
SMPD1-208ENST00000533123 SAMD14Q8IZD0 417 aaPredicted RBP17.26■□□□□ 0.35
SMPD1-208ENST00000533123 MARVELD2Q8N4S9 558 aa17.26■□□□□ 0.35
SMPD1-208ENST00000533123 OR5D16Q8NGK9 328 aa17.26■□□□□ 0.35
SMPD1-208ENST00000533123 DOK4Q8TEW6 326 aa17.26■□□□□ 0.35
SMPD1-208ENST00000533123 ALOXE3Q9BYJ1 711 aa17.26■□□□□ 0.35
SMPD1-208ENST00000533123 NECTIN3Q9NQS3 549 aa17.26■□□□□ 0.35
SMPD1-208ENST00000533123 ADPRHL2Q9NX46 363 aa17.26■□□□□ 0.35
SMPD1-208ENST00000533123 MKL2Q9ULH7 1088 aa17.26■□□□□ 0.35
SMPD1-208ENST00000533123 U3KQV3 271 aa17.26■□□□□ 0.35
SMPD1-208ENST00000533123 IGLV3-12A0A075B6K2 115 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 HMGN4O00479 90 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 BCHEP06276 602 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 ZGLP1P0C6A0 271 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 PPP2R1BP30154 601 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 KCNJ10P78508 379 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 SLC38A5Q8WUX1 472 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 POP5Q969H6 163 aaKnown RBP17.25■□□□□ 0.35
SMPD1-208ENST00000533123 SLC35G5Q96KT7 338 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 OSBPL11Q9BXB4 747 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 TGIF2Q9GZN2 237 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 SOX17Q9H6I2 414 aaPredicted RBP17.25■□□□□ 0.35
SMPD1-208ENST00000533123 SDK2Q58EX2 2172 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 M0QX08 132 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 CNOT3O75175 753 aaKnown RBP17.25■□□□□ 0.35
SMPD1-208ENST00000533123 FABP3P05413 133 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 TNFRSF1BP20333 461 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 MC3RP41968 323 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 CYP27C1Q4G0S4 372 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 ANKRD34AQ69YU3 496 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 UGT2A3Q6UWM9 527 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 MED25Q71SY5 747 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 TMPRSS7Q7RTY8 843 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 STK32CQ86UX6 486 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 TSLPQ969D9 159 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 YIPF4Q9BSR8 244 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 ANGPT4Q9Y264 503 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 SPTBN4Q9H254 2564 aa17.25■□□□□ 0.35
SMPD1-208ENST00000533123 G3V2T6 193 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 PLOD2O00469 737 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 NME6O75414 186 aaPredicted RBP17.24■□□□□ 0.35
SMPD1-208ENST00000533123 PCBP3P57721 371 aaKnown RBP17.24■□□□□ 0.35
SMPD1-208ENST00000533123 GABREP78334 506 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 RHAGQ02094 409 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 MAPK11Q15759 364 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 FREM2Q5SZK8 3169 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 ZNF517Q6ZMY9 492 aaPredicted RBP17.24■□□□□ 0.35
SMPD1-208ENST00000533123 TIPARPQ7Z3E1 657 aaKnown RBP17.24■□□□□ 0.35
SMPD1-208ENST00000533123 CHERPQ8IWX8 916 aaKnown RBP17.24■□□□□ 0.35
SMPD1-208ENST00000533123 ST13P4Q8IZP2 240 aaPredicted RBP17.24■□□□□ 0.35
SMPD1-208ENST00000533123 KAT2AQ92830 837 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 DOHHQ9BU89 302 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms