RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 SARAFQ96BY9 339 aa27.76■■■□□ 2.03
SSSCA1-207ENST00000533115 BTBD9Q96Q07 612 aa27.76■■■□□ 2.03
SSSCA1-207ENST00000533115 STMN4Q9H169 189 aaPredicted RBP27.76■■■□□ 2.03
SSSCA1-207ENST00000533115 CHST11Q9NPF2 352 aa27.76■■■□□ 2.03
SSSCA1-207ENST00000533115 TNFRSF10DQ9UBN6 386 aa27.76■■■□□ 2.03
SSSCA1-207ENST00000533115 NCKAP5O14513 1909 aa27.76■■■□□ 2.03
SSSCA1-207ENST00000533115 HNRNPRO43390 633 aaKnown RBP27.75■■■□□ 2.03
SSSCA1-207ENST00000533115 TYROBPO43914 113 aa27.75■■■□□ 2.03
SSSCA1-207ENST00000533115 LINC00032P0C843 101 aa27.75■■■□□ 2.03
SSSCA1-207ENST00000533115 TACR1P25103 407 aa27.75■■■□□ 2.03
SSSCA1-207ENST00000533115 ZNF844Q08AG5 666 aa27.75■■■□□ 2.03
SSSCA1-207ENST00000533115 TMEM81Q6P7N7 255 aa27.75■■■□□ 2.03
SSSCA1-207ENST00000533115 ZCCHC23Q6ZST2 131 aa27.75■■■□□ 2.03
SSSCA1-207ENST00000533115 CLYBLQ8N0X4 340 aa27.75■■■□□ 2.03
SSSCA1-207ENST00000533115 NTNG2Q96CW9 530 aa27.75■■■□□ 2.03
SSSCA1-207ENST00000533115 EGLN2Q96KS0 407 aa27.75■■■□□ 2.03
SSSCA1-207ENST00000533115 FCRL1Q96LA6 429 aa27.75■■■□□ 2.03
SSSCA1-207ENST00000533115 VSTM2LQ96N03 204 aa27.75■■■□□ 2.03
SSSCA1-207ENST00000533115 METTL7AQ9H8H3 244 aa27.75■■■□□ 2.03
SSSCA1-207ENST00000533115 COQ3Q9NZJ6 369 aa27.75■■■□□ 2.03
SSSCA1-207ENST00000533115 ACAD8Q9UKU7 415 aa27.75■■■□□ 2.03
SSSCA1-207ENST00000533115 TRAF6Q9Y4K3 522 aa27.75■■■□□ 2.03
SSSCA1-207ENST00000533115 TEX15Q9BXT5 2789 aa27.74■■■□□ 2.03
SSSCA1-207ENST00000533115 TMEM233B4DJY2 109 aa27.74■■■□□ 2.03
SSSCA1-207ENST00000533115 JUNP05412 331 aaKnown RBP27.74■■■□□ 2.03
SSSCA1-207ENST00000533115 GDF1P27539 372 aa27.74■■■□□ 2.03
SSSCA1-207ENST00000533115 NTSP30990 170 aa27.74■■■□□ 2.03
SSSCA1-207ENST00000533115 MASP1P48740 699 aa27.74■■■□□ 2.03
SSSCA1-207ENST00000533115 UGT3A2Q3SY77 523 aa27.74■■■□□ 2.03
SSSCA1-207ENST00000533115 DESI1Q6ICB0 168 aa27.74■■■□□ 2.03
SSSCA1-207ENST00000533115 RPRMLQ8N4K4 120 aa27.74■■■□□ 2.03
SSSCA1-207ENST00000533115 SDCCAG3Q96C92 435 aa27.74■■■□□ 2.03
SSSCA1-207ENST00000533115 TMEM41AQ96HV5 264 aa27.74■■■□□ 2.03
SSSCA1-207ENST00000533115 NODALQ96S42 347 aa27.74■■■□□ 2.03
SSSCA1-207ENST00000533115 FOLH1BQ9HBA9 442 aa27.74■■■□□ 2.03
SSSCA1-207ENST00000533115 TAS2R9Q9NYW1 312 aa27.74■■■□□ 2.03
SSSCA1-207ENST00000533115 SPRR3Q9UBC9 169 aa27.74■■■□□ 2.03
SSSCA1-207ENST00000533115 CACNA1DQ01668 2161 aa27.74■■■□□ 2.03
SSSCA1-207ENST00000533115 FIGNL2A6NMB9 653 aa27.73■■■□□ 2.03
SSSCA1-207ENST00000533115 NME6O75414 186 aaPredicted RBP27.73■■■□□ 2.03
SSSCA1-207ENST00000533115 ERN1O75460 977 aaKnown RBP27.73■■■□□ 2.03
SSSCA1-207ENST00000533115 SLITRK5O94991 958 aa27.73■■■□□ 2.03
SSSCA1-207ENST00000533115 CT45A8P0DMV1 189 aa27.73■■■□□ 2.03
SSSCA1-207ENST00000533115 CT45A9P0DMV2 189 aa27.73■■■□□ 2.03
SSSCA1-207ENST00000533115 ENDOUP21128 410 aaKnown RBP27.73■■■□□ 2.03
SSSCA1-207ENST00000533115 SERPINB5P36952 375 aa27.73■■■□□ 2.03
SSSCA1-207ENST00000533115 CT45A2Q5DJT8 189 aa27.73■■■□□ 2.03
SSSCA1-207ENST00000533115 FNDC7Q5VTL7 733 aa27.73■■■□□ 2.03
SSSCA1-207ENST00000533115 ZNF585AQ6P3V2 769 aa27.73■■■□□ 2.03
SSSCA1-207ENST00000533115 TWIST2Q8WVJ9 160 aa27.73■■■□□ 2.03
SSSCA1-207ENST00000533115 MARVELD3Q96A59 401 aa27.73■■■□□ 2.03
SSSCA1-207ENST00000533115 SLC6A15Q9H2J7 730 aa27.73■■■□□ 2.03
SSSCA1-207ENST00000533115 GLIPR2Q9H4G4 154 aa27.73■■■□□ 2.03
SSSCA1-207ENST00000533115 A0A087WV62 115 aa27.72■■■□□ 2.03
SSSCA1-207ENST00000533115 LSM1O15116 133 aaKnown RBP27.72■■■□□ 2.03
SSSCA1-207ENST00000533115 RGS16O15492 202 aaPredicted RBP27.72■■■□□ 2.03
SSSCA1-207ENST00000533115 UGT2B11O75310 529 aa27.72■■■□□ 2.03
SSSCA1-207ENST00000533115 BPGMP07738 259 aa27.72■■■□□ 2.03
SSSCA1-207ENST00000533115 ACVR2AP27037 513 aa27.72■■■□□ 2.03
SSSCA1-207ENST00000533115 CORO7P57737 925 aa27.72■■■□□ 2.03
SSSCA1-207ENST00000533115 RFTN2Q52LD8 501 aaPredicted RBP27.72■■■□□ 2.03
SSSCA1-207ENST00000533115 SH2D4BQ5SQS7 431 aa27.72■■■□□ 2.03
SSSCA1-207ENST00000533115 WLSQ5T9L3 541 aa27.72■■■□□ 2.03
SSSCA1-207ENST00000533115 DDIASQ8IXT1 998 aa27.72■■■□□ 2.03
SSSCA1-207ENST00000533115 LIX1Q8N485 282 aa27.72■■■□□ 2.03
SSSCA1-207ENST00000533115 NEIL3Q8TAT5 605 aa27.72■■■□□ 2.03
SSSCA1-207ENST00000533115 TMBIM1Q969X1 311 aa27.72■■■□□ 2.03
SSSCA1-207ENST00000533115 GNRHR2Q96P88 292 aa27.72■■■□□ 2.03
SSSCA1-207ENST00000533115 CCT7Q99832 543 aa27.72■■■□□ 2.03
SSSCA1-207ENST00000533115 C15orf41Q9Y2V0 281 aa27.72■■■□□ 2.03
SSSCA1-207ENST00000533115 TMED5Q9Y3A6 229 aa27.72■■■□□ 2.03
SSSCA1-207ENST00000533115 COQ9O75208 318 aa27.71■■■□□ 2.03
SSSCA1-207ENST00000533115 SDC1P18827 310 aa27.71■■■□□ 2.03
SSSCA1-207ENST00000533115 MC3RP41968 323 aa27.71■■■□□ 2.03
SSSCA1-207ENST00000533115 ETV4P43268 484 aa27.71■■■□□ 2.03
SSSCA1-207ENST00000533115 TRPC1P48995 793 aa27.71■■■□□ 2.03
SSSCA1-207ENST00000533115 RPL38P63173 70 aaKnown RBP27.71■■■□□ 2.03
SSSCA1-207ENST00000533115 PSPHP78330 225 aa27.71■■■□□ 2.03
SSSCA1-207ENST00000533115 SNTA1Q13424 505 aa27.71■■■□□ 2.03
SSSCA1-207ENST00000533115 SLC30A6Q6NXT4 461 aa27.71■■■□□ 2.03
SSSCA1-207ENST00000533115 TMEM107Q6UX40 140 aa27.71■■■□□ 2.03
SSSCA1-207ENST00000533115 NPSR1Q6W5P4 371 aa27.71■■■□□ 2.03
SSSCA1-207ENST00000533115 CA5BP1Q8WTZ4 195 aa27.71■■■□□ 2.03
SSSCA1-207ENST00000533115 RND1Q92730 232 aa27.71■■■□□ 2.03
SSSCA1-207ENST00000533115 GFM2Q969S9 779 aaKnown RBP27.71■■■□□ 2.03
SSSCA1-207ENST00000533115 AMDHD1Q96NU7 426 aa27.71■■■□□ 2.03
SSSCA1-207ENST00000533115 COL21A1Q96P44 957 aa27.71■■■□□ 2.03
SSSCA1-207ENST00000533115 UBQLN3Q9H347 655 aa27.71■■■□□ 2.03
SSSCA1-207ENST00000533115 OR6C70A6NIJ9 312 aa27.7■■■□□ 2.02
SSSCA1-207ENST00000533115 PLOD2O00469 737 aa27.7■■■□□ 2.02
SSSCA1-207ENST00000533115 PIP5K1BO14986 540 aa27.7■■■□□ 2.02
SSSCA1-207ENST00000533115 CTIFO43310 598 aaKnown RBP27.7■■■□□ 2.02
SSSCA1-207ENST00000533115 REM1O75628 298 aa27.7■■■□□ 2.02
SSSCA1-207ENST00000533115 TRAPPC6AO75865 159 aa27.7■■■□□ 2.02
SSSCA1-207ENST00000533115 TUBBP07437 444 aa27.7■■■□□ 2.02
SSSCA1-207ENST00000533115 ARRB2P32121 409 aa27.7■■■□□ 2.02
SSSCA1-207ENST00000533115 PMPCAQ10713 525 aa27.7■■■□□ 2.02
SSSCA1-207ENST00000533115 GALNTL6Q49A17 601 aa27.7■■■□□ 2.02
SSSCA1-207ENST00000533115 TIGD3Q6B0B8 471 aa27.7■■■□□ 2.02
SSSCA1-207ENST00000533115 ACAD11Q709F0 780 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms