RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	ACTG1	P63261	375 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ACTG2	P63267	376 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ACTC1	P68032	377 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ACTA1	P68133	377 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	CRMP1	Q14194	572 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	NDUFA5	Q16718	116 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	WHAMMP3	Q1A5X7	153 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	PLEKHN1	Q494U1	663 aa	Predicted RBP	4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	COQ5	Q5HYK3	327 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	HIST2H2AA3	Q6FI13	130 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	G2E3	Q7L622	706 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ANKRD33	Q7Z3H0	272 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	GPR141	Q7Z602	305 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	DTX2	Q86UW9	622 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	PARG	Q86W56	976 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	MCOLN2	Q8IZK6	566 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	PARP8	Q8N3A8	854 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	RYBP	Q8N488	228 aa	Predicted RBP	4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ARFGAP1	Q8N6T3	406 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	PCDH20	Q8N6Y1	951 aa	Known RBP	4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ASB5	Q8WWX0	329 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	IFT81	Q8WYA0	676 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	HSD17B8	Q92506	261 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	C3orf30	Q96M34	536 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	NAPG	Q99747	312 aa	Predicted RBP	4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	DPH7	Q9BTV6	452 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	LRRC2	Q9BYS8	371 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	TPSD1	Q9BZJ3	242 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	POLE4	Q9NR33	117 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	IMP3	Q9NV31	184 aa	Known RBP	4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	C1RL	Q9NZP8	487 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	SLC9A2	Q9UBY0	812 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	EMCN	Q9ULC0	261 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	PLA2R1	Q13018	1463 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ASXL1	Q8IXJ9	1541 aa		4.84	□□□□□ -1.64
ECHDC1-222	ENST00000531967	KIAA1210	Q9ULL0	1709 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	USP32	Q8NFA0	1604 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	TRAV24	A0A0B4J272	114 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	UBE2QL1	A1L167	161 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ARHGEF33	A8MVX0	844 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ZNF99	A8MXY4	864 aa	Predicted RBP	4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	PGRMC1	O00264	195 aa	Known RBP	4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	HSPA12A	O43301	675 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	LAT	O43561	262 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	SCEL	O95171	688 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	PLA2G1B	P04054	148 aa	Known RBP	4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	FEN1	P39748	380 aa	Known RBP	4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ACTR1B	P42025	376 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	HGFAC	Q04756	655 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	CYP24A1	Q07973	514 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	GK3P	Q14409	553 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	TMEM132D	Q14C87	1099 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	RNF151	Q2KHN1	245 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	TIGD5	Q53EQ6	642 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	TIGD3	Q6B0B8	471 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	DOK6	Q6PKX4	331 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ZNF534	Q76KX8	674 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	H2BFWT	Q7Z2G1	175 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	PID1	Q7Z2X4	250 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	DHDDS	Q86SQ9	333 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	MARVELD2	Q8N4S9	558 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	C12orf76	Q8N812	135 aa	Predicted RBP	4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	TTC29	Q8NA56	475 aa	Predicted RBP	4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	SSMEM1	Q8WWF3	244 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	FAM3C	Q92520	227 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	RNF183	Q96D59	192 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	AMDHD1	Q96NU7	426 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	GAN	Q9H2C0	597 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	C12orf4	Q9NQ89	552 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	SLC2A4RG	Q9NR83	387 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	INIP	Q9NRY2	104 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	WARS2	Q9UGM6	360 aa	Known RBP	4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	SPHKAP	Q2M3C7	1700 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ADGRB2	O60241	1585 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	KDM5A	P29375	1690 aa	Known RBP	4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ADGRL1	O94910	1474 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	PPIAL4C	A0A0B4J2A2	164 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ZNF840P	A6NDX5	716 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	DDTL	A6NHG4	134 aa	Predicted RBP	4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	KLRC4-KLRK1	H3BQV0	150 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967		M0R296	226 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	SIVA1	O15304	175 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	TOX3	O15405	576 aa	Predicted RBP	4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	SLC28A2	O43868	658 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	RAB3D	O95716	219 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	OCM	P0CE72	109 aa	Predicted RBP	4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	PPIAL4G	P0DN37	164 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	CALM1	P0DP23	149 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	CALM2	P0DP24	149 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	CALM3	P0DP25	149 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	GOT1	P17174	413 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ITPKB	P27987	946 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	GTF2E2	P29084	291 aa	Known RBP	4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	AHR	P35869	848 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	SLC1A4	P43007	532 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ART1	P52961	327 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	CEBPG	P53567	150 aa		4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	COPB1	P53618	953 aa	Known RBP	4.83	□□□□□ -1.64
ECHDC1-222	ENST00000531967	PSMD4	P55036	377 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms