RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 HTR5AP47898 357 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 RFX5P48382 616 aaPredicted RBP3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 DNA2P51530 1060 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 PLP2Q04941 152 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 RBM39Q14498 530 aaKnown RBP3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 CHRNA6Q15825 494 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 C3AR1Q16581 482 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 FAM83EQ2M2I3 478 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 WLSQ5T9L3 541 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 PLCXD3Q63HM9 321 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 ATL3Q6DD88 541 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 OR4F3Q6IEY1 312 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 KIAA1161Q6NSJ0 714 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 RHBDD2Q6NTF9 364 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 RNASEKQ6P5S7 137 aaKnown RBP3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 FAM171BQ6P995 826 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 Q6ZRG5 221 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 VTCN1Q7Z7D3 282 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 MOB3BQ86TA1 216 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 ITIH5Q86UX2 942 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 COMTD1Q86VU5 262 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 TMEM17Q86X19 198 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 CCDC50Q8IVM0 306 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 LINC00518Q8N0U6 118 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 TMEM123Q8N131 208 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 SPEM1Q8N4L4 309 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 CSGALNACT2Q8N6G5 542 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 MAB21L3Q8N8X9 362 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 NEXN-AS1Q8NBZ9 246 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 OR9A1PQ8NGU1 263 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 SCFD1Q8WVM8 642 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 OR1E3Q8WZA6 343 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 UPRTQ96BW1 309 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 SLC47A1Q96FL8 570 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 MSANTD3Q96H12 275 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 ELMO2Q96JJ3 720 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 CAPNS2Q96L46 248 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 C8orf49Q96NF6 230 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 CCT8L2Q96SF2 557 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 COPS8Q99627 209 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 LPAR4Q99677 370 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 CENPKQ9BS16 269 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 FUCA2Q9BTY2 467 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 EGLN3Q9H6Z9 239 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 DCTPP1Q9H773 170 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 SUDS3Q9H7L9 328 aaPredicted RBP3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 IL1RL2Q9HB29 575 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 MRPS30Q9NP92 439 aaKnown RBP3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 ECHDC1Q9NTX5 307 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 HIF1ANQ9NWT6 349 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 C11orf21Q9P2W6 132 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 GALPQ9UBC7 116 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 CYTH4Q9UIA0 394 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 PURGQ9UJV8 347 aaKnown RBP3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 ABCG2Q9UNQ0 655 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 INSL6Q9Y581 213 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 HS3ST3B1Q9Y662 390 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 RNF215Q9Y6U7 377 aa3.84□□□□□ -1.79
AC055878.1-201ENST00000531858 NPIPA5A0A0B4J1W7 369 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 IGLV5-39A0A0G2JS06 123 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 SMIM35A0A1B0GVV1 85 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 SH3PXD2BA1X283 911 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 CCDC182A6NF36 153 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 NPIPA5E9PKD4 350 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 H0YL77 283 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 PDLIM1O00151 329 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 OR7A17O14581 309 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 ABCD4O14678 606 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 EPHB6O15197 1021 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 ATP6V0E1O15342 81 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 DUX1O43812 170 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 KCNJ13O60928 360 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 N4BP1O75113 896 aaKnown RBP3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 APOA1P02647 267 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 TNNI1P19237 187 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 AOC1P19801 751 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 PGCP20142 388 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 AADACP22760 399 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 FDFT1P37268 417 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 GYG1P46976 350 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 LEPRP48357 1165 aaKnown RBP3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 CASP4P49662 377 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 SLC7A2P52569 658 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 GAS1P54826 345 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 DCDC1P59894 354 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 RPL24P83731 157 aaKnown RBP3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 OGDHQ02218 1023 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 CRMP1Q14194 572 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 ATXN7L3Q14CW9 347 aaPredicted RBP3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 STK38Q15208 465 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 SLC15A2Q16348 729 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 TMEM119Q4V9L6 283 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 CYBRD1Q53TN4 286 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 CEP78Q5JTW2 689 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 DCAF10Q5QP82 559 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 METTL11BQ5VVY1 283 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 RAD9BQ6WBX8 426 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 ZNF66Q6ZN08 573 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 ZNF841Q6ZN19 808 aa3.83□□□□□ -1.8
AC055878.1-201ENST00000531858 STXBP4Q6ZWJ1 553 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms