RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 ABHD17CQ6PCB6 329 aa16.55■□□□□ 0.24
SCN4B-205ENST00000531550 VN1R5Q7Z5H4 357 aa16.55■□□□□ 0.24
SCN4B-205ENST00000531550 LIX1Q8N485 282 aa16.55■□□□□ 0.24
SCN4B-205ENST00000531550 AGR3Q8TD06 166 aa16.55■□□□□ 0.24
SCN4B-205ENST00000531550 PAQR8Q8TEZ7 354 aa16.55■□□□□ 0.24
SCN4B-205ENST00000531550 UBE2E3Q969T4 207 aa16.55■□□□□ 0.24
SCN4B-205ENST00000531550 KCNA7Q96RP8 456 aa16.55■□□□□ 0.24
SCN4B-205ENST00000531550 ELAC2Q9BQ52 826 aaKnown RBP16.55■□□□□ 0.24
SCN4B-205ENST00000531550 COPS7BQ9H9Q2 264 aaPredicted RBP16.55■□□□□ 0.24
SCN4B-205ENST00000531550 ACKR4Q9NPB9 350 aa16.55■□□□□ 0.24
SCN4B-205ENST00000531550 PFDN4Q9NQP4 134 aa16.55■□□□□ 0.24
SCN4B-205ENST00000531550 QPCTLQ9NXS2 382 aa16.55■□□□□ 0.24
SCN4B-205ENST00000531550 ZNF629Q9UEG4 869 aaPredicted RBP16.55■□□□□ 0.24
SCN4B-205ENST00000531550 TSC22D4Q9Y3Q8 395 aa16.55■□□□□ 0.24
SCN4B-205ENST00000531550 TIMM22Q9Y584 194 aa16.55■□□□□ 0.24
SCN4B-205ENST00000531550 PCDHGA11Q9Y5H2 935 aa16.55■□□□□ 0.24
SCN4B-205ENST00000531550 DNAJC15Q9Y5T4 150 aa16.55■□□□□ 0.24
SCN4B-205ENST00000531550 SERTM1A2A2V5 107 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 TRPC5OSA6NMA1 111 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 TMEM233B4DJY2 109 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 SNX3O60493 162 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 EPPINO95925 133 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 KRT6AP02538 564 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 KRT6BP04259 564 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 SERPINB3P29508 390 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 TIMP3P35625 211 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 KRT6CP48668 564 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 ZNF136P52737 540 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 CPSF6Q16630 551 aaKnown RBP eCLIP16.54■□□□□ 0.24
SCN4B-205ENST00000531550 HIST2H2ACQ16777 129 aaPredicted RBP16.54■□□□□ 0.24
SCN4B-205ENST00000531550 HIST2H2AA3Q6FI13 130 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 LYPD8Q6UX82 237 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 PRIMA1Q86XR5 153 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 LACC1Q8IV20 430 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 KRT78Q8N1N4 520 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 LINC01560Q8TB33 94 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 NUBPLQ8TB37 319 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 SLC22A8Q8TCC7 542 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 SPACA9Q96E40 222 aaPredicted RBP16.54■□□□□ 0.24
SCN4B-205ENST00000531550 FAM107BQ9H098 131 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 PROK2Q9HC23 129 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 NPHS2Q9NP85 383 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 SNX6Q9UNH7 406 aa16.54■□□□□ 0.24
SCN4B-205ENST00000531550 ANKDD1BA6NHY2 528 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 CLCA1A8K7I4 914 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 AHRRA9YTQ3 701 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 MANBAO00462 879 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 GOSR1O95249 250 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 CD53P19397 219 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 ID2Q02363 134 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 TBL3Q12788 808 aaKnown RBP16.53■□□□□ 0.24
SCN4B-205ENST00000531550 ADNP2Q6IQ32 1131 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 MED27Q6P2C8 311 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 EPGNQ6UW88 154 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 MAVSQ7Z434 540 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 SPATA21Q7Z572 469 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 KIF18BQ86Y91 864 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 MYLK4Q86YV6 388 aaPredicted RBP16.53■□□□□ 0.24
SCN4B-205ENST00000531550 C9orf40Q8IXQ3 194 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 LAS2Q8IYD9 372 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 RFWD2Q8NHY2 731 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 WDR20Q8TBZ3 569 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 BCAS4Q8TDM0 211 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 TWIST2Q8WVJ9 160 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 REPS1Q96D71 796 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 MDFIQ99750 246 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 MEAF6Q9HAF1 191 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 LYRM4Q9HD34 91 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 PRDM7Q9NQW5 492 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 BEX4Q9NWD9 120 aaPredicted RBP16.53■□□□□ 0.24
SCN4B-205ENST00000531550 ZNF490Q9ULM2 529 aaPredicted RBP16.53■□□□□ 0.24
SCN4B-205ENST00000531550 FIS1Q9Y3D6 152 aa16.53■□□□□ 0.24
SCN4B-205ENST00000531550 C15orf38-AP3S2A0A0A6YYH1 394 aa16.52■□□□□ 0.24
SCN4B-205ENST00000531550 FAM171A2A8MVW0 826 aa16.52■□□□□ 0.24
SCN4B-205ENST00000531550 ULK1O75385 1050 aa16.52■□□□□ 0.24
SCN4B-205ENST00000531550 IL2RAP01589 272 aa16.52■□□□□ 0.24
SCN4B-205ENST00000531550 AQP5P55064 265 aa16.52■□□□□ 0.24
SCN4B-205ENST00000531550 NKX6-1P78426 367 aaPredicted RBP16.52■□□□□ 0.24
SCN4B-205ENST00000531550 SORDQ00796 357 aa16.52■□□□□ 0.24
SCN4B-205ENST00000531550 BTKQ06187 659 aa16.52■□□□□ 0.24
SCN4B-205ENST00000531550 CRYZQ08257 329 aaKnown RBP16.52■□□□□ 0.24
SCN4B-205ENST00000531550 SHEQ5VZ18 495 aa16.52■□□□□ 0.24
SCN4B-205ENST00000531550 FRG2Q64ET8 278 aa16.52■□□□□ 0.24
SCN4B-205ENST00000531550 OR7G3Q8NG95 312 aa16.52■□□□□ 0.24
SCN4B-205ENST00000531550 ZNF473Q8WTR7 871 aaKnown RBP16.52■□□□□ 0.24
SCN4B-205ENST00000531550 NUDT8Q8WV74 236 aa16.52■□□□□ 0.24
SCN4B-205ENST00000531550 ANKRD9Q96BM1 317 aaPredicted RBP16.52■□□□□ 0.24
SCN4B-205ENST00000531550 HSPBAP1Q96EW2 488 aa16.52■□□□□ 0.24
SCN4B-205ENST00000531550 JSRP1Q96MG2 331 aaPredicted RBP16.52■□□□□ 0.24
SCN4B-205ENST00000531550 FRG2BQ96QU4 278 aa16.52■□□□□ 0.24
SCN4B-205ENST00000531550 MAPKAP1Q9BPZ7 522 aa16.52■□□□□ 0.24
SCN4B-205ENST00000531550 TUBB1Q9H4B7 451 aa16.52■□□□□ 0.24
SCN4B-205ENST00000531550 ELOVL6Q9H5J4 265 aa16.52■□□□□ 0.24
SCN4B-205ENST00000531550 RABEP2Q9H5N1 569 aa16.52■□□□□ 0.24
SCN4B-205ENST00000531550 ADGRE2Q9UHX3 823 aa16.52■□□□□ 0.24
SCN4B-205ENST00000531550 CHCHD2Q9Y6H1 151 aaPredicted RBP16.52■□□□□ 0.24
SCN4B-205ENST00000531550 FN1P02751 2386 aaKnown RBP16.51■□□□□ 0.23
SCN4B-205ENST00000531550 KIAA1324LA8MWY0 1029 aaPredicted RBP16.51■□□□□ 0.23
SCN4B-205ENST00000531550 NDUFAB1O14561 156 aa16.51■□□□□ 0.23
SCN4B-205ENST00000531550 LRATO95237 230 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms