RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 AAGABQ6PD74 315 aa14.39□□□□□ -0.11
CHMP4A-204ENST00000530996 SCIMPQ6UWF3 145 aa14.39□□□□□ -0.11
CHMP4A-204ENST00000530996 Q71RC1 249 aaPredicted RBP14.39□□□□□ -0.11
CHMP4A-204ENST00000530996 P4HA3Q7Z4N8 544 aa14.39□□□□□ -0.11
CHMP4A-204ENST00000530996 PLD6Q8N2A8 252 aaKnown RBP14.39□□□□□ -0.11
CHMP4A-204ENST00000530996 TMBIM1Q969X1 311 aa14.39□□□□□ -0.11
CHMP4A-204ENST00000530996 ZFP3Q96NJ6 502 aa14.39□□□□□ -0.11
CHMP4A-204ENST00000530996 NTMT1Q9BV86 223 aa14.39□□□□□ -0.11
CHMP4A-204ENST00000530996 OR2B2Q9GZK3 357 aa14.39□□□□□ -0.11
CHMP4A-204ENST00000530996 ACSS3Q9H6R3 686 aa14.39□□□□□ -0.11
CHMP4A-204ENST00000530996 ZBTB26Q9HCK0 441 aa14.39□□□□□ -0.11
CHMP4A-204ENST00000530996 DLL4Q9NR61 685 aa14.39□□□□□ -0.11
CHMP4A-204ENST00000530996 UTS2RQ9UKP6 389 aa14.39□□□□□ -0.11
CHMP4A-204ENST00000530996 EIF3LQ9Y262 564 aaKnown RBP14.39□□□□□ -0.11
CHMP4A-204ENST00000530996 FRG2CA6NGY1 282 aa14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 CBR3O75828 277 aa14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 SMNDC1O75940 238 aaKnown RBP eCLIP14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 CBX7O95931 251 aa14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 PDYNP01213 254 aa14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 S1PR1P21453 382 aa14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 GGTA1PQ4G0N0 100 aa14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 TRMT12Q53H54 448 aaKnown RBP14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 BIVMQ86UB2 503 aa14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 TRIM42Q8IWZ5 723 aa14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 C1orf52Q8N6N3 182 aaKnown RBP14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 SIMC1Q8NDZ2 872 aa14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 SLC44A1Q8WWI5 657 aa14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 COL21A1Q96P44 957 aa14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 PIGMQ9H3S5 423 aa14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 NMRK1Q9NWW6 199 aa14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 NINJ2Q9NZG7 142 aa14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 JKAMPQ9P055 326 aa14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 PACSIN3Q9UKS6 424 aa14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 EXO1Q9UQ84 846 aaKnown RBP14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 WIF1Q9Y5W5 379 aa14.38□□□□□ -0.11
CHMP4A-204ENST00000530996 HRGP04196 525 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 RPS17P08708 135 aaKnown RBP14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 CPN1P15169 458 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 PTGDSP41222 190 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 STARP49675 285 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 GUCY2DQ02846 1103 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 DUSP2Q05923 314 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 GALNT1Q10472 559 aaPredicted RBP14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 MAP4K2Q12851 820 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 TEX35Q5T0J7 233 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 UBAP2Q5T6F2 1119 aaKnown RBP14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 LETMD1Q6P1Q0 360 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 TMEM81Q6P7N7 255 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 SYT10Q6XYQ8 523 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 CHMP1BQ7LBR1 199 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 PLCZ1Q86YW0 608 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 OR4K17Q8NGC6 315 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 WNT2BQ93097 391 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 ISL2Q96A47 359 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 DACH2Q96NX9 599 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 PAFAH2Q99487 392 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 PLEKHF2Q9H8W4 249 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 GIMAP4Q9NUV9 329 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 FETUBQ9UGM5 382 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 NDRG3Q9UGV2 375 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 FBXL2Q9UKC9 423 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 CES1P1Q9UKY3 287 aa14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 RPH3AQ9Y2J0 694 aaPredicted RBP14.37□□□□□ -0.11
CHMP4A-204ENST00000530996 ARHGAP21Q5T5U3 1957 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 GNG14A0A1W2PPG7 69 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 PLOD2O00469 737 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 ABCB7O75027 752 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 SRD5A2P31213 254 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 PPICP45877 212 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 CDH13P55290 713 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 HMGCS1Q01581 520 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 LTBQ06643 244 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 CKAP4Q07065 602 aaKnown RBP14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 MGAT2Q10469 447 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 ZNF155Q12901 538 aaPredicted RBP14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 FAM219BQ5XKK7 198 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 OR5M10Q6IEU7 315 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 LARP4Q71RC2 724 aaKnown RBP eCLIP14.36□□□□□ -0.113e-10■■□□□ 13.2
CHMP4A-204ENST00000530996 UBQLNLQ8IYU4 475 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 CNEP1R1Q8N9A8 125 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 WDSUB1Q8N9V3 476 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 OR9A2Q8NGT5 310 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 CDC26Q8NHZ8 85 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 TRPC4APQ8TEL6 797 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 ZNF483Q8TF39 744 aaPredicted RBP14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 KAT2AQ92830 837 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 EXOSC8Q96B26 276 aaKnown RBP14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 TM4SF18Q96CE8 201 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 CNRIP1Q96F85 164 aaPredicted RBP14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 C18orf12Q96KH6 178 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 FAM111AQ96PZ2 611 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 ADOQ96SZ5 270 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 SMR3AQ99954 134 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 MRPL46Q9H2W6 279 aaKnown RBP14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 ZNF395Q9H8N7 513 aaPredicted RBP14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 ANKRA2Q9H9E1 313 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 BRF2Q9HAW0 419 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 BEX4Q9NWD9 120 aaPredicted RBP14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 CLCF1Q9UBD9 225 aa14.36□□□□□ -0.11
CHMP4A-204ENST00000530996 OR10H1Q9Y4A9 318 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms