RNA–Protein interactions for RNA: ENST00000530345.1

NUP98-217, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-217ENST00000530345 NAB1Q13506 487 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 DDX39BQ13838 428 aaKnown RBP6.75□□□□□ -1.33
NUP98-217ENST00000530345 OR4D1Q15615 310 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 TBC1D1Q86TI0 1168 aaPredicted RBP6.75□□□□□ -1.33
NUP98-217ENST00000530345 YRDCQ86U90 279 aaKnown RBP6.75□□□□□ -1.33
NUP98-217ENST00000530345 SAMD14Q8IZD0 417 aaPredicted RBP6.75□□□□□ -1.33
NUP98-217ENST00000530345 GCNT2Q8N0V5 402 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 CIARTQ8N365 385 aaPredicted RBP6.75□□□□□ -1.33
NUP98-217ENST00000530345 FBXO36Q8NEA4 188 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 RHEBL1Q8TAI7 183 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 TRPC4APQ8TEL6 797 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 SLC44A1Q8WWI5 657 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 IGFBPL1Q8WX77 278 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 HGDQ93099 445 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 GTPBP3Q969Y2 492 aaKnown RBP6.75□□□□□ -1.33
NUP98-217ENST00000530345 OMA1Q96E52 524 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 SLC35A4Q96G79 324 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 ZNF845Q96IR2 970 aaPredicted RBP6.75□□□□□ -1.33
NUP98-217ENST00000530345 MS4A14Q96JA4 679 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 MARK4Q96L34 752 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 WFIKKN1Q96NZ8 548 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 COL21A1Q96P44 957 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 OSBPL9Q96SU4 736 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 MTERF1Q99551 399 aaKnown RBP6.75□□□□□ -1.33
NUP98-217ENST00000530345 RBBP8Q99708 897 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 G6PC3Q9BUM1 346 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 DDX47Q9H0S4 455 aaKnown RBP6.75□□□□□ -1.33
NUP98-217ENST00000530345 NXF5Q9H1B4 397 aaKnown RBP6.75□□□□□ -1.33
NUP98-217ENST00000530345 PAQR5Q9NXK6 330 aaPredicted RBP6.75□□□□□ -1.33
NUP98-217ENST00000530345 C6orf203Q9P0P8 240 aaPredicted RBP6.75□□□□□ -1.33
NUP98-217ENST00000530345 DKKL1Q9UK85 242 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 PPP2R2CQ9Y2T4 447 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 ARFGEF3Q5TH69 2177 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 CUBNO60494 3623 aa6.75□□□□□ -1.33
NUP98-217ENST00000530345 TRIM64A6NGJ6 449 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 TRIM64BA6NI03 449 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 SAP18O00422 153 aaKnown RBP6.74□□□□□ -1.33
NUP98-217ENST00000530345 PHGDHO43175 533 aaKnown RBP6.74□□□□□ -1.33
NUP98-217ENST00000530345 SIAH2O43255 324 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 TMPRSS11DO60235 418 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 EEDO75530 441 aaKnown RBP6.74□□□□□ -1.33
NUP98-217ENST00000530345 SOX30O94993 753 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 F12P00748 615 aaPredicted RBP6.74□□□□□ -1.33
NUP98-217ENST00000530345 LTA4HP09960 611 aaKnown RBP6.74□□□□□ -1.33
NUP98-217ENST00000530345 CSNK2A2P19784 350 aaPredicted RBP6.74□□□□□ -1.33
NUP98-217ENST00000530345 NT5EP21589 574 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 TBXA2RP21731 343 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 CCKARP32238 428 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 SPRP35270 261 aaPredicted RBP6.74□□□□□ -1.33
NUP98-217ENST00000530345 SOX18P35713 384 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 KRT20P35900 424 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 PTGDSP41222 190 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 XKP51811 444 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 ALDH18A1P54886 795 aaKnown RBP6.74□□□□□ -1.33
NUP98-217ENST00000530345 ATP5J2P56134 94 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 DSCR4P56555 118 aaPredicted RBP6.74□□□□□ -1.33
NUP98-217ENST00000530345 RPS3AP61247 264 aaKnown RBP6.74□□□□□ -1.33
NUP98-217ENST00000530345 HMGCS1Q01581 520 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 DR1Q01658 176 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 SRYQ05066 204 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 PDIA2Q13087 525 aaKnown RBP6.74□□□□□ -1.33
NUP98-217ENST00000530345 TMEM64Q6YI46 380 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 SSX8Q7RTT4 187 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 ISCA2Q86U28 154 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 MYLK4Q86YV6 388 aaPredicted RBP6.74□□□□□ -1.33
NUP98-217ENST00000530345 ZNF611Q8N823 705 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 CNEP1R1Q8N9A8 125 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 L3MBTL4Q8NA19 623 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 ZNF675Q8TD23 568 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 GFM2Q969S9 779 aaKnown RBP6.74□□□□□ -1.33
NUP98-217ENST00000530345 ESAMQ96AP7 390 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 STARD4Q96DR4 205 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 TRMT61AQ96FX7 289 aaKnown RBP6.74□□□□□ -1.33
NUP98-217ENST00000530345 PGM2Q96G03 612 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 BTBD9Q96Q07 612 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 ATOH8Q96SQ7 321 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 USB1Q9BQ65 265 aaKnown RBP6.74□□□□□ -1.33
NUP98-217ENST00000530345 FAIM2Q9BWQ8 316 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 STMN4Q9H169 189 aaPredicted RBP6.74□□□□□ -1.33
NUP98-217ENST00000530345 ALG9Q9H6U8 611 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 RNF122Q9H9V4 155 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 LRTM1Q9HBL6 345 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 SERHLQ9NQF3 203 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 NMRK1Q9NWW6 199 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 KLHL28Q9NXS3 571 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 ADAM21Q9UKJ8 722 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 TMCO1Q9UM00 188 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 NFU1Q9UMS0 254 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 SNX12Q9UMY4 172 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 ACOT9Q9Y305 439 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 SNX8Q9Y5X2 465 aa6.74□□□□□ -1.33
NUP98-217ENST00000530345 UQCRHLA0A096LP55 91 aa6.73□□□□□ -1.33
NUP98-217ENST00000530345 GLOD5A6NK44 160 aa6.73□□□□□ -1.33
NUP98-217ENST00000530345 RNF212BA8MTL3 300 aa6.73□□□□□ -1.33
NUP98-217ENST00000530345 EFCAB8A8MWE9 144 aa6.73□□□□□ -1.33
NUP98-217ENST00000530345 CCDC188H7C350 402 aa6.73□□□□□ -1.33
NUP98-217ENST00000530345 HS3ST1O14792 307 aa6.73□□□□□ -1.33
NUP98-217ENST00000530345 UGT2B11O75310 529 aa6.73□□□□□ -1.33
NUP98-217ENST00000530345 PRKRAO75569 313 aaKnown RBP6.73□□□□□ -1.33
NUP98-217ENST00000530345 SLITRK5O94991 958 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms