RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 LASP1Q14847 261 aaKnown RBP11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 EXT1Q16394 746 aa11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CRTC2Q53ET0 693 aaPredicted RBP11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 MFSD12Q6NUT3 480 aa11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 GPR155Q7Z3F1 870 aa11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 RNF130Q86XS8 419 aa11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 C10orf111Q8N326 155 aa11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 FBXO30Q8TB52 745 aa11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 M1APQ8TC57 530 aa11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ELP5Q8TE02 316 aa11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 OTUB1Q96FW1 271 aaPredicted RBP11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 VPS50Q96JG6 964 aa11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 VSTM2LQ96N03 204 aa11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 FOLH1BQ9HBA9 442 aa11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 HEMK1Q9Y5R4 338 aaPredicted RBP11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 KALRNO60229 2985 aa11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 TRBV11-1A0A0K0K1C0 115 aa11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 RRP8O43159 456 aaKnown RBP11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 KRT75O95678 551 aa11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 MAP3K8P41279 467 aa11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 MAN2A2P49641 1150 aa11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 EBPQ15125 230 aaKnown RBP11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 DCAF10Q5QP82 559 aa11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 EXOSC6Q5RKV6 272 aaKnown RBP11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 BHLHB9Q6PI77 547 aa11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ANGPTL8Q6UXH0 198 aa11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 HSDL2Q6YN16 418 aa11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SLC16A11Q8NCK7 471 aa11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 OR52N2Q8NGI0 321 aa11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 THAP4Q8WY91 577 aa11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 TMEM125Q96AQ2 219 aa11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 MCUR1Q96AQ8 359 aa11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SLC35G5Q96KT7 338 aa11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 HOPXQ9BPY8 73 aaPredicted RBP11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ITPAQ9BY32 194 aa11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 MMP25Q9NPA2 562 aa11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CMTM6Q9NX76 183 aa11.27□□□□□ -0.6
TRAF3IP2-211ENST00000528599 TMEM200CA6NKL6 621 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 OR6C76A6NM76 312 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 ACP2P11117 423 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 ITGAMP11215 1152 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 ETFAP13804 333 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 GPX2P18283 190 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 MATN1P21941 496 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 PPIBP23284 216 aaKnown RBP11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 CLCN2P51788 898 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 RNF4P78317 190 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 VAC14Q08AM6 782 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 ZNF155Q12901 538 aaPredicted RBP11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 MYBPC3Q14896 1274 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 RGNQ15493 299 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 COL28A1Q2UY09 1125 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 TNFAIP8L2Q6P589 184 aaPredicted RBP11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 SLC15A3Q8IY34 581 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 DEFB107AQ8IZN7 70 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 PGAM4Q8N0Y7 254 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 HORMAD2Q8N7B1 307 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 ZSCAN1Q8NBB4 408 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 OR8J3Q8NGG0 315 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 OR5D16Q8NGK9 328 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 MIPOL1Q8TD10 442 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 HOXB13Q92826 284 aaPredicted RBP11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 ADIPOR1Q96A54 375 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 THUMPD3Q9BV44 507 aaKnown RBP11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 ACTRT3Q9BYD9 372 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 WWTR1Q9GZV5 400 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 OR51I1Q9H343 314 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 DENND2DQ9H6A0 471 aaPredicted RBP11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 LIN28AQ9H9Z2 209 aaKnown RBP11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 PRODH2Q9UF12 536 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 KCNE3Q9Y6H6 103 aa11.27□□□□□ -0.61
TRAF3IP2-211ENST00000528599 C2orf92A0A1B0GVN3 265 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 ARGFXA6NJG6 315 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 EVPLLA8MZ36 301 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 NME4O00746 187 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 ZFAND5O76080 213 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 SERPINA7P05543 415 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 CT45A8P0DMV1 189 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 CT45A9P0DMV2 189 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 ICAM2P13598 275 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 PGM1P36871 562 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 CRATP43155 626 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 PRIM2P49643 509 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 SLC7A2P52569 658 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 PSG6Q00889 435 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 CHAF1BQ13112 559 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 DUSP5Q16690 384 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 CT45A2Q5DJT8 189 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 CDC73Q6P1J9 531 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 ZCCHC12Q6PEW1 402 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 C16orf89Q6UX73 402 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 NPSR1Q6W5P4 371 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 CCDC81Q6ZN84 652 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 LRRC69Q6ZNQ3 347 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 C16orf47Q6ZP98 133 aaPredicted RBP11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 SLC29A4Q7RTT9 530 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 KBTBD2Q8IY47 623 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 ZNF441Q8N8Z8 693 aa11.26□□□□□ -0.61
TRAF3IP2-211ENST00000528599 CDRT4Q8N9R6 151 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms