RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 REP15Q6BDI9 236 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 CYP20A1Q6UW02 462 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 LCTLQ6UWM7 567 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 SPATA19Q7Z5L4 167 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 TAF8Q7Z7C8 310 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 C17orf64Q86WR6 236 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 ZNF761Q86XN6 746 aaPredicted RBP3.94□□□□□ -1.78
CD44-226ENST00000527889 FUNDC1Q8IVP5 155 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 C10orf67Q8IYJ2 551 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 LIX1Q8N485 282 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 KRTCAP2Q8N6L1 136 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 OR8K3Q8NH51 312 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 CLHC1Q8NHS4 586 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 MAGEC3Q8TD91 643 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 SMPDL3AQ92484 453 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 NCLNQ969V3 563 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 CXorf40BQ96DE9 158 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 CMTM5Q96DZ9 223 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 RNF125Q96EQ8 232 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 TEX37Q96LM6 180 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 PPP3R2Q96LZ3 170 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 MTERF1Q99551 399 aaKnown RBP3.94□□□□□ -1.78
CD44-226ENST00000527889 NPAS2Q99743 824 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 BTBD10Q9BSF8 475 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 HAUS8Q9BT25 410 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 TUBB6Q9BUF5 446 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 EBPLQ9BY08 206 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 C1orf21Q9H246 121 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 GHITMQ9H3K2 345 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 SERHL2Q9H4I8 314 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 MVB12BQ9H7P6 319 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 PELI2Q9HAT8 420 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 LRTM1Q9HBL6 345 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 TM9SF3Q9HD45 589 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 SLC40A1Q9NP59 571 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 PFDN4Q9NQP4 134 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.94□□□□□ -1.78
CD44-226ENST00000527889 TRNAU1APQ9NX07 287 aaKnown RBP3.94□□□□□ -1.78
CD44-226ENST00000527889 SPHK1Q9NYA1 384 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 TAS2R1Q9NYW7 299 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 VSX1Q9NZR4 365 aaPredicted RBP3.94□□□□□ -1.78
CD44-226ENST00000527889 NDUFAF4Q9P032 175 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 CCDC167Q9P0B6 97 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 DLGAP2Q9P1A6 1054 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 TAAR2Q9P1P5 351 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 BAIAP2L1Q9UHR4 511 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 KCND3Q9UK17 655 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 RPS6KA6Q9UK32 745 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 PACSIN3Q9UKS6 424 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 SNX6Q9UNH7 406 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 SATB2Q9UPW6 733 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 DLGAP4Q9Y2H0 992 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 KLHL20Q9Y2M5 609 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 CCL27Q9Y4X3 112 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 HEBP2Q9Y5Z4 205 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 KCNE2Q9Y6J6 123 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.94□□□□□ -1.78
CD44-226ENST00000527889 PMF1-BGLAPU3KQ54 211 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 SPTA1P02549 2419 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 CACNA1CQ13936 2221 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 DSPP15924 2871 aaKnown RBP3.93□□□□□ -1.78
CD44-226ENST00000527889 IGKV1-8A0A0C4DH67 115 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 FEZF1A0PJY2 475 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 PIPSLA2A3N6 862 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 PMS2P1A4D2B8 440 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 ASPDHA6ND91 283 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 CFAP73A6NFT4 308 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 TMEM221A6NGB7 291 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 MAGEB17A8MXT2 336 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 H0YIV9 168 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 L7N2F9 121 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 M0R296 226 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 TLR4O00206 839 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 SAP18O00422 153 aaKnown RBP3.93□□□□□ -1.78
CD44-226ENST00000527889 SLC22A2O15244 555 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 MAGEB3O15480 346 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 CFLARO15519 480 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 SMPD2O60906 423 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 SDC3O75056 442 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 RSL1D1O76021 490 aaKnown RBP3.93□□□□□ -1.78
CD44-226ENST00000527889 PDE5AO76074 875 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 SORBS2O94875 1100 aaKnown RBP3.93□□□□□ -1.78
CD44-226ENST00000527889 LRATO95237 230 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 SERPIND1P05546 499 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 SNRNP70P08621 437 aaKnown RBP3.93□□□□□ -1.78
CD44-226ENST00000527889 CHRM5P08912 532 aaPredicted RBP3.93□□□□□ -1.78
CD44-226ENST00000527889 C1GALT1C1LP0DN25 315 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 THRAP10827 490 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 G6PDP11413 515 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 BCKDHAP12694 445 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 F3P13726 295 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 IDO1P14902 403 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 AMD1P17707 334 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 POLR2CP19387 275 aaPredicted RBP3.93□□□□□ -1.78
CD44-226ENST00000527889 CHMP24386 653 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 ABCD3P28288 659 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 IL12AP29459 219 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 CSTF2P33240 577 aaKnown RBP eCLIP3.93□□□□□ -1.78
CD44-226ENST00000527889 PGM1P36871 562 aa3.93□□□□□ -1.78
CD44-226ENST00000527889 ZFP36L2P47974 494 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms