RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 ADAMDEC1O15204 470 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 RPP40O75818 363 aaKnown RBP7.1□□□□□ -1.27
SOX6-208ENST00000527619 LALBAP00709 142 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 HMBSP08397 361 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 SLC6A1P30531 599 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 HTRA4P83105 476 aaPredicted RBP7.1□□□□□ -1.27
SOX6-208ENST00000527619 SCARB2Q14108 478 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 GANABQ14697 944 aaKnown RBP7.1□□□□□ -1.27
SOX6-208ENST00000527619 SIRPB2Q5JXA9 342 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 LIPKQ5VXJ0 399 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 MEDAGQ5VYS4 303 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 VASNQ6EMK4 673 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 C22orf42Q6IC83 251 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 C17orf107Q6ZR85 190 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 RASSF6Q6ZTQ3 369 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 GPR155Q7Z3F1 870 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 PDZD3Q86UT5 571 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 ADGRF3Q8IZF5 1079 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 NANOGP1Q8N7R0 232 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 ZNF784Q8NCA9 323 aaPredicted RBP7.1□□□□□ -1.27
SOX6-208ENST00000527619 REPS2Q8NFH8 660 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 OR8J2Q8NGG1 315 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 RFT1Q96AA3 541 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 IMP4Q96G21 291 aaKnown RBP7.1□□□□□ -1.27
SOX6-208ENST00000527619 SCMH1Q96GD3 660 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 C14orf144Q96I85 54 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 KCTD7Q96MP8 289 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 ZIC5Q96T25 663 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 GPR21Q99679 349 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 NIPSNAP1Q9BPW8 284 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 SORBS1Q9BX66 1292 aaKnown RBP7.1□□□□□ -1.27
SOX6-208ENST00000527619 CPEB1Q9BZB8 566 aaKnown RBP7.1□□□□□ -1.27
SOX6-208ENST00000527619 OR51V1Q9H2C8 321 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 ANKRD19PQ9H560 264 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 GAREM1Q9H706 876 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 RRAGCQ9HB90 399 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 DUSP22Q9NRW4 184 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 SLC22A11Q9NSA0 550 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 TMEM184CQ9NVA4 438 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 RLIMQ9NVW2 624 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 TREM2Q9NZC2 230 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 MPP6Q9NZW5 540 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 PISDQ9UG56 409 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 PADI2Q9Y2J8 665 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 TP53BP1Q12888 1972 aaPredicted RBP7.1□□□□□ -1.27
SOX6-208ENST00000527619 RALGAPA2Q2PPJ7 1873 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 A8MXK9 166 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 J3QW42 95 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 DNASE2O00115 360 aaPredicted RBP7.1□□□□□ -1.27
SOX6-208ENST00000527619 SCAMP2O15127 329 aaKnown RBP7.1□□□□□ -1.27
SOX6-208ENST00000527619 HPGDSO60760 199 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 KCNK5O95279 499 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 OTCP00480 354 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 RLN2P04090 185 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 NUDT7P0C024 238 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 ZNF888P0CJ79 500 aaPredicted RBP7.1□□□□□ -1.27
SOX6-208ENST00000527619 SAGP10523 405 aaPredicted RBP7.1□□□□□ -1.27
SOX6-208ENST00000527619 TXNP10599 105 aaKnown RBP7.1□□□□□ -1.27
SOX6-208ENST00000527619 DNASE1P24855 282 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 NNMTP40261 264 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 RABIFP47224 123 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 OAZ1P54368 228 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 MAZP56270 477 aaKnown RBP7.1□□□□□ -1.27
SOX6-208ENST00000527619 C2orf80Q0P641 193 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 DYRK1AQ13627 763 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 GTF2H2Q13888 395 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 C1DQ13901 141 aaKnown RBP7.1□□□□□ -1.27
SOX6-208ENST00000527619 ALG11Q2TAA5 492 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 FRMPD2BQ6IN97 320 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 GTF2H2CQ6P1K8 395 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 CMIPQ8IY22 773 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 LGI4Q8N135 537 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 B3GALNT2Q8NCR0 500 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 OR4L1Q8NH43 312 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 OTUB1Q96FW1 271 aaPredicted RBP7.1□□□□□ -1.27
SOX6-208ENST00000527619 LRIG1Q96JA1 1093 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 SGCZQ96LD1 299 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 COQ10AQ96MF6 247 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 ERMAPQ96PL5 475 aaPredicted RBP7.1□□□□□ -1.27
SOX6-208ENST00000527619 OSMRQ99650 979 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 TMEM175Q9BSA9 504 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 KATNB1Q9BVA0 655 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 CXCL16Q9H2A7 254 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 LRTM1Q9HBL6 345 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 OSER1Q9NX31 292 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 NKIRAS2Q9NYR9 191 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 NUDT4Q9NZJ9 180 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 HCN3Q9P1Z3 774 aa7.1□□□□□ -1.27
SOX6-208ENST00000527619 RFPL4AA6NLU0 287 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 B4E171 279 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 RFPL4AL1F8VTS6 287 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 FOXE1O00358 373 aaPredicted RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 RFXANKO14593 260 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 EFSO43281 561 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 MMP20O60882 483 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 HNF1AP20823 631 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 MPIP34949 423 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 OMPP47874 163 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 EVX1P49640 407 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 STK19P49842 368 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms