RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 C2orf16Q68DN1 1984 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 TTC28Q96AY4 2481 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-208ENST00000527323 LYRM1O43325 122 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 MMP20O60882 483 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 OR12D1P0DN82 309 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 AVPR1BP47901 424 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 PRLHRP49683 370 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 PRKAG1P54619 331 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 FABP5Q01469 135 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 TAP2Q03519 686 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 ARHGAP15Q53QZ3 475 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 ELMOD2Q8IZ81 293 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 TCTE3Q8IZS6 198 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 APOBEC4Q8WW27 367 aaKnown RBP11.8□□□□□ -0.52
CAPN1-208ENST00000527323 ZBED6CLQ96FA7 236 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-208ENST00000527323 F2RL3Q96RI0 385 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 ZNF576Q9H609 170 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 KCNK12Q9HB15 430 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 A4GALTQ9NPC4 353 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 STMN3Q9NZ72 180 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 KLHL21Q9UJP4 597 aa11.8□□□□□ -0.52
CAPN1-208ENST00000527323 LOC102723532A0A0G2JNH3 316 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 A0A1W2PQ72 361 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 SNTNA6NMZ2 147 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 HCN1O60741 890 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 CRYZL1O95825 349 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 TIMP2P16035 220 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 ATP6V1E1P36543 226 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 CCT3P49368 545 aaKnown RBP11.79□□□□□ -0.52
CAPN1-208ENST00000527323 SMSP52788 366 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 RNLSQ5VYX0 342 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 PARM1Q6UWI2 310 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 MARCH9Q86YJ5 346 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 PLCZ1Q86YW0 608 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 OR5H6Q8NGV6 325 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 IRF7Q92985 503 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 UBE2E3Q969T4 207 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 NXPE3Q969Y0 559 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 KIAA1143Q96AT1 154 aaPredicted RBP11.79□□□□□ -0.52
CAPN1-208ENST00000527323 WACQ9BTA9 647 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 HDHD2Q9H0R4 259 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 MCUBQ9NWR8 336 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 FBXW2Q9UKT8 454 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 PLAGL1Q9UM63 463 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 SCN8AQ9UQD0 1980 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 PRR23AA6NEV1 266 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 ISM1B1AKI9 464 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 ORC5O43913 435 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 OLFM2O95897 454 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 ELFN1P0C7U0 828 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 BUD31P41223 144 aaPredicted RBP11.79□□□□□ -0.52
CAPN1-208ENST00000527323 MAPK9P45984 424 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 SEC13P55735 322 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 COX10Q12887 443 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 C3orf38Q5JPI3 329 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 CLEC12AQ5QGZ9 265 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 SLC9B2Q86UD5 537 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 SIX5Q8N196 739 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 OR5D16Q8NGK9 328 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 TREX2Q9BQ50 279 aaPredicted RBP11.79□□□□□ -0.52
CAPN1-208ENST00000527323 OR2AG1Q9H205 316 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 EGLN3Q9H6Z9 239 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 TESQ9UGI8 421 aaKnown RBP11.79□□□□□ -0.52
CAPN1-208ENST00000527323 OBSL1O75147 1896 aa11.79□□□□□ -0.52
CAPN1-208ENST00000527323 MTCL1Q9Y4B5 1905 aaKnown RBP11.78□□□□□ -0.52
CAPN1-208ENST00000527323 ZDBF2Q9HCK1 2354 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 A0A0G2JMP0 313 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 HMGN4O00479 90 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 DDX5P17844 614 aaKnown RBP11.78□□□□□ -0.52
CAPN1-208ENST00000527323 DDCP20711 480 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 HOXD11P31277 338 aaPredicted RBP11.78□□□□□ -0.52
CAPN1-208ENST00000527323 MLLT1Q03111 559 aaPredicted RBP11.78□□□□□ -0.52
CAPN1-208ENST00000527323 IKBIPQ70UQ0 350 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 KLHDC8AQ8IYD2 350 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 KRT78Q8N1N4 520 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 TMEM145Q8NBT3 493 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 TEX47Q8TBZ9 253 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 SMPDL3AQ92484 453 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 CHFRQ96EP1 664 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 QRFPRQ96P65 431 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 MYADMQ96S97 322 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 MED18Q9BUE0 208 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 REPIN1Q9BWE0 567 aaKnown RBP11.78□□□□□ -0.52
CAPN1-208ENST00000527323 SPHK2Q9NRA0 654 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 A4GNTQ9UNA3 340 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 SLC9A8Q9Y2E8 581 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 PCM1Q15154 2024 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 C5orf67F2Z3F1 127 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 PROM1O43490 865 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 PLOD3O60568 738 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 CH25HO95992 272 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 C1QBP02746 253 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 ACP2P11117 423 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 ACADMP11310 421 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 CELP19835 753 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 SOX18P35713 384 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 OR3A3P47888 321 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 MTNR1AP48039 350 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 DCDC1P59894 354 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms