RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 PDK4Q16654 411 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 TMEM35AQ53FP2 167 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 PRR31Q5SQ13 230 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 ABHD17CQ6PCB6 329 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 AAGABQ6PD74 315 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 CYP20A1Q6UW02 462 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 SBSNQ6UWP8 590 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 GALNT7Q86SF2 657 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 C9orf40Q8IXQ3 194 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 PDIK1LQ8N165 341 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 LRRC25Q8N386 305 aaPredicted RBP5.69□□□□□ -1.5
PABPC1-220ENST00000522658 ZNF321PQ8N8H1 164 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 ZNF441Q8N8Z8 693 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 NAXEQ8NCW5 288 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 OR1J4Q8NGS1 313 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 OR14L1PQ8NHC6 308 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 SPATA3Q8NHX4 192 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 PTPMT1Q8WUK0 201 aaPredicted RBP5.69□□□□□ -1.5
PABPC1-220ENST00000522658 PIK3IP1Q96FE7 263 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 SMIM10Q96HG1 83 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 SENP5Q96HI0 755 aaPredicted RBP5.69□□□□□ -1.5
PABPC1-220ENST00000522658 FBXL20Q96IG2 436 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 RILPQ96NA2 401 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 PIP5K1AQ99755 562 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 MAPKAP1Q9BPZ7 522 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 ERVK-6Q9BXR3 956 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 WWTR1Q9GZV5 400 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 CXorf56Q9H5V9 222 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 RPF2Q9H7B2 306 aaKnown RBP5.69□□□□□ -1.5
PABPC1-220ENST00000522658 NT5DC2Q9H857 520 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 ACTR8Q9H981 624 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 CALHM2Q9HA72 323 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 SEMA4BQ9NPR2 832 aaPredicted RBP5.69□□□□□ -1.5
PABPC1-220ENST00000522658 GALNT8Q9NY28 637 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 KLRF1Q9NZS2 232 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 DKKL1Q9UK85 242 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 ERVK-19Q9WJR5 959 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 SLC6A5Q9Y345 797 aa5.69□□□□□ -1.5
PABPC1-220ENST00000522658 ANKHD1Q8IWZ3 2542 aaKnown RBP5.68□□□□□ -1.5
PABPC1-220ENST00000522658 C2orf92A0A1B0GVN3 265 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 MBD3L4A6NDZ8 208 aaPredicted RBP5.68□□□□□ -1.5
PABPC1-220ENST00000522658 MBD3L3A6NE82 208 aaPredicted RBP5.68□□□□□ -1.5
PABPC1-220ENST00000522658 MBD3L5A6NJ08 208 aaPredicted RBP5.68□□□□□ -1.5
PABPC1-220ENST00000522658 LRRC3CA6NJW4 275 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 PGRMC1O00264 195 aaKnown RBP5.68□□□□□ -1.5
PABPC1-220ENST00000522658 CYR61O00622 381 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 FGF17O60258 216 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 NPHS1O60500 1241 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 SH3BGRLO75368 114 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 STK16O75716 305 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 ETHE1O95571 254 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 ACSL3O95573 720 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 ACTL6AO96019 429 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 AHSGP02765 367 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 ALDOAP04075 364 aaKnown RBP5.68□□□□□ -1.5
PABPC1-220ENST00000522658 HRGP04196 525 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 RFPL3SP0C7P2 107 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 NR2F6P10588 404 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 HIST1H1TP22492 207 aaPredicted RBP5.68□□□□□ -1.5
PABPC1-220ENST00000522658 ATP5A1P25705 553 aaKnown RBP5.68□□□□□ -1.5
PABPC1-220ENST00000522658 KRT20P35900 424 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 CDK9P50750 372 aaKnown RBP5.68□□□□□ -1.5
PABPC1-220ENST00000522658 TNFRSF17Q02223 184 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 SRYQ05066 204 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 GAB1Q13480 694 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 NTRK2Q16620 822 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 PPP1R3AQ16821 1122 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 ZNF791Q3KP31 576 aaPredicted RBP5.68□□□□□ -1.5
PABPC1-220ENST00000522658 PPP4R4Q6NUP7 873 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 MED27Q6P2C8 311 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 PRSS57Q6UWY2 283 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 ANGPTL8Q6UXH0 198 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 IFNEQ86WN2 208 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 GPSM1Q86YR5 675 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 CNTN4Q8IWV2 1026 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 OR4N5Q8IXE1 308 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 ST13P4Q8IZP2 240 aaPredicted RBP5.68□□□□□ -1.5
PABPC1-220ENST00000522658 GCNT2Q8N0V5 402 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 CNEP1R1Q8N9A8 125 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 ACOT4Q8N9L9 421 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 BBOF1Q8ND07 529 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 MBD3L2Q8NHZ7 208 aaPredicted RBP5.68□□□□□ -1.5
PABPC1-220ENST00000522658 ZNF721Q8TF20 911 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 TMEM171Q8WVE6 324 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 CDKL2Q92772 493 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 TANKQ92844 425 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 RIT1Q92963 219 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 INTS12Q96CB8 462 aaKnown RBP5.68□□□□□ -1.5
PABPC1-220ENST00000522658 NTNG2Q96CW9 530 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 REPS1Q96D71 796 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 ARSGQ96EG1 525 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 CMTM7Q96FZ5 175 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 C8orf49Q96NF6 230 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 QRFPRQ96P65 431 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 F2RL3Q96RI0 385 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 TIMP4Q99727 224 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 SLC39A3Q9BRY0 314 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 OSBPL11Q9BXB4 747 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 EHD1Q9H4M9 534 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 PLEKHF2Q9H8W4 249 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms