RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 SLC6A2P23975 617 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 CCT3P49368 545 aaKnown RBP11.53□□□□□ -0.56
PABPC1-219ENST00000522387 TXNL4AP83876 142 aaKnown RBP11.53□□□□□ -0.56
PABPC1-219ENST00000522387 RHDQ02161 417 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 C8orf82Q6P1X6 216 aaPredicted RBP11.53□□□□□ -0.56
PABPC1-219ENST00000522387 ANKRD37Q7Z713 158 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 MSRB3Q8IXL7 192 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 PCYOX1LQ8NBM8 494 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 TSPAN14Q8NG11 270 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 OR5D16Q8NGK9 328 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 FKBP10Q96AY3 582 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 ELP4Q96EB1 424 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 FAM120BQ96EK7 910 aaKnown RBP11.53□□□□□ -0.56
PABPC1-219ENST00000522387 CXorf21Q9HAI6 301 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 CLK4Q9HAZ1 481 aaKnown RBP11.53□□□□□ -0.56
PABPC1-219ENST00000522387 MRGBPQ9NV56 204 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 CMTM6Q9NX76 183 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 HS3ST3B1Q9Y662 390 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 CDC14CA4D256 554 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 KLK10O43240 276 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 TLX3O43711 291 aaPredicted RBP11.53□□□□□ -0.56
PABPC1-219ENST00000522387 ATP1B1P05026 303 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 LIPCP11150 499 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 NCK1P16333 377 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 WT1P19544 449 aaPredicted RBP11.53□□□□□ -0.56
PABPC1-219ENST00000522387 PTPN6P29350 595 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 STT3AP46977 705 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 LASP1Q14847 261 aaKnown RBP11.53□□□□□ -0.56
PABPC1-219ENST00000522387 COX20Q5RI15 118 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.53□□□□□ -0.56
PABPC1-219ENST00000522387 NANOGP8Q6NSW7 305 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 TNFAIP8L2Q6P589 184 aaPredicted RBP11.53□□□□□ -0.56
PABPC1-219ENST00000522387 SPPL2CQ8IUH8 684 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 VWA5B2Q8N398 1253 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 TRIML2Q8N7C3 387 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 OR52R1Q8NGF1 315 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 OR5P2Q8WZ92 322 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 C16orf58Q96GQ5 468 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 SENP5Q96HI0 755 aaPredicted RBP11.53□□□□□ -0.56
PABPC1-219ENST00000522387 CCDC115Q96NT0 180 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 OSBPL11Q9BXB4 747 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 WDR54Q9H977 334 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 NANOGQ9H9S0 305 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 TIMMDC1Q9NPL8 285 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 MAT2BQ9NZL9 334 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 DTX4Q9Y2E6 619 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 MMACHCQ9Y4U1 282 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 SNX13Q9Y5W8 968 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 V9GYQ6 96 aa11.53□□□□□ -0.56
PABPC1-219ENST00000522387 TPST1O60507 370 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 TRMUO75648 421 aaKnown RBP11.52□□□□□ -0.57
PABPC1-219ENST00000522387 CDH2P19022 906 aaPredicted RBP11.52□□□□□ -0.57
PABPC1-219ENST00000522387 ATP6V1B2P21281 511 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 IL10P22301 178 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 FRKP42685 505 aaPredicted RBP11.52□□□□□ -0.57
PABPC1-219ENST00000522387 CRATP43155 626 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 RFX3P48380 749 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 TRAP1Q12931 704 aaKnown RBP11.52□□□□□ -0.57
PABPC1-219ENST00000522387 CEBPEQ15744 281 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 MTX3Q5HYI7 312 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 PAPD4Q6PIY7 484 aaKnown RBP11.52□□□□□ -0.57
PABPC1-219ENST00000522387 KIRREL2Q6UWL6 708 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 C16orf47Q6ZP98 133 aaPredicted RBP11.52□□□□□ -0.57
PABPC1-219ENST00000522387 CARM1Q86X55 608 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 RNF130Q86XS8 419 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 SLC44A2Q8IWA5 706 aaPredicted RBP11.52□□□□□ -0.57
PABPC1-219ENST00000522387 SLC2A12Q8TD20 617 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 SLCO4A1Q96BD0 722 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 CGREF1Q99674 301 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 GPATCH1Q9BRR8 931 aaKnown RBP11.52□□□□□ -0.57
PABPC1-219ENST00000522387 TPT1P8Q9HAU6 139 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 ACSS1Q9NUB1 689 aaPredicted RBP11.52□□□□□ -0.57
PABPC1-219ENST00000522387 GALNT8Q9NY28 637 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 VPS4AQ9UN37 437 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 MAPRE3Q9UPY8 281 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 PADI2Q9Y2J8 665 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 MSRB2Q9Y3D2 182 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 NEUROG3Q9Y4Z2 214 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 MED13Q9UHV7 2174 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 NUP210LQ5VU65 1888 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 TCRBV3S1A0A5B6 114 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 CLIC1O00299 241 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 NKX2-8O15522 239 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 DXOO77932 396 aaKnown RBP11.52□□□□□ -0.57
PABPC1-219ENST00000522387 H6PDO95479 791 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 ONECUT2O95948 504 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 HMGN2P05204 90 aaKnown RBP11.52□□□□□ -0.57
PABPC1-219ENST00000522387 ADRB1P08588 477 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 ZNF23P17027 643 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 SLC7A1P30825 629 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 HOXD11P31277 338 aaPredicted RBP11.52□□□□□ -0.57
PABPC1-219ENST00000522387 SERTAD2Q14140 314 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 ZNF628Q5EBL2 1059 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 SAMD4BQ5PRF9 694 aaKnown RBP11.52□□□□□ -0.57
PABPC1-219ENST00000522387 OLIG3Q7RTU3 272 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 CPEB2Q7Z5Q1 589 aaKnown RBP11.52□□□□□ -0.57
PABPC1-219ENST00000522387 PLPP5Q8NEB5 264 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 NUP43Q8NFH3 380 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 CANT1Q8WVQ1 401 aa11.52□□□□□ -0.57
PABPC1-219ENST00000522387 SLC9A6Q92581 669 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms