RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 NEDD8-MDP1E9PL57 170 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 H3BTX0 84 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 XPO1O14980 1071 aaKnown RBP2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 CTAGE5O15320 804 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 TM9SF1O15321 606 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 ZNF749O43361 778 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 GPRIN2O60269 458 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 NEBLO76041 1014 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 NXPH2O95156 264 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 PCCBP05166 539 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 ASNSP08243 561 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 MBL2P11226 248 aaPredicted RBP2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 CPN1P15169 458 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 AOC1P19801 751 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 CA8P35219 290 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 RFC2P35250 354 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 MATKP42679 507 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 VCPP55072 806 aaKnown RBP2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 BTG3Q14201 252 aaPredicted RBP2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 GCKRQ14397 625 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 PCK2Q16822 640 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 MOGAT2Q3SYC2 334 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 TCHHL1Q5QJ38 904 aaPredicted RBP2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 DMKNQ6E0U4 476 aaPredicted RBP2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 PYHIN1Q6K0P9 492 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 NUFIP2Q7Z417 695 aaKnown RBP2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 TMEM110Q86TL2 294 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 VASH2Q86V25 355 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 GPBP1Q86WP2 473 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 PHC2Q8IXK0 858 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 ZNF781Q8N8C0 355 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 STEAP2Q8NFT2 490 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 OR1B1Q8NGR6 318 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 OR10T2Q8NGX3 314 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 FBXO30Q8TB52 745 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 NANPQ8TBE9 248 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 SPPL2AQ8TCT8 520 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 PCNPQ8WW12 178 aaKnown RBP2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 DNASE2BQ8WZ79 361 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 TAF15Q92804 592 aaKnown RBP eCLIP2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 AGAP4Q96P64 663 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 TNFRSF13CQ96RJ3 184 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 TPPP3Q9BW30 176 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 GPR174Q9BXC1 333 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 POLR1EQ9GZS1 481 aaKnown RBP2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 RIBC2Q9H4K1 309 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 KAT8Q9H7Z6 458 aaKnown RBP2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 GORASP2Q9H8Y8 452 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 WDR76Q9H967 626 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 COG4Q9H9E3 785 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 B3GAT2Q9NPZ5 323 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 SPHK2Q9NRA0 654 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 FAM114A2Q9NRY5 505 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 DEPPQ9NTK1 212 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 RDH8Q9NYR8 311 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 MLXQ9UH92 298 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 FZR1Q9UM11 496 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 DUSP12Q9UNI6 340 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 EXOGQ9Y2C4 368 aaKnown RBP2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 RAB3GAP2Q9H2M9 1393 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 AKNAQ7Z591 1439 aa2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 TCOF1Q13428 1488 aaKnown RBP2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 TCF20Q9UGU0 1960 aaKnown RBP2.81□□□□□ -1.96
HMGN1P28-201ENST00000521340 RAPGEF6Q8TEU7 1601 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 EIF4G3O43432 1585 aaKnown RBP2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 NCOA2Q15596 1464 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 FHOD3Q2V2M9 1422 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 FGD6Q6ZV73 1430 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 ZSCAN5CA6NGD5 496 aaPredicted RBP2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 IGLON5A6NGN9 336 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 CYB561D2O14569 222 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 EFNA2O43921 213 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 RANBP6O60518 1105 aaKnown RBP2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 TBX19O60806 448 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 B3GAT3O94766 335 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 UFL1O94874 794 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 OPN1LWP04000 364 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 CALCBP10092 127 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 XRCC1P18887 633 aaPredicted RBP2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 NT5EP21589 574 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 HNRNPA2B1P22626 353 aaKnown RBP2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 RPL9P32969 192 aaKnown RBP2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 IFNAR2P48551 515 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 GSK3BP49841 420 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 TMEM50BP56557 158 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 HERVK_113P63132 956 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 ERVK-8P63133 956 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 FKBP3Q00688 224 aaKnown RBP2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 GPM6BQ13491 265 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 TFDP1Q14186 410 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 SIX1Q15475 284 aaPredicted RBP2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 MTHFSDQ2M296 383 aaKnown RBP2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 C17orf58Q2M2W7 97 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 SHROOM1Q2M3G4 852 aaPredicted RBP2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 ZFP69Q49AA0 526 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 ZNF311Q5JNZ3 666 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 TAF3Q5VWG9 929 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 LRRC8BQ6P9F7 803 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 LCLAT1Q6UWP7 414 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms