RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 UPK3BL2E5RIL1 263 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 CDC123O75794 336 aaPredicted RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 UBBP0CG47 229 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 UBCP0CG48 685 aaKnown RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 T-ENOLP0DO92 83 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 CBLP22681 906 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 RPS27AP62979 156 aaKnown RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 UBA52P62987 128 aaKnown RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 UBXN2BQ14CS0 331 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 C3orf33Q6P1S2 294 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 PRSS48Q7RTY5 328 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 BORCS8Q96FH0 119 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 ZNF599Q96NL3 588 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 CSTBP04080 98 aaKnown RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 NPRL3Q12980 569 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 PTPRRQ15256 657 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 PCGF3Q3KNV8 242 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 METTL11BQ5VVY1 283 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 GDF6Q6KF10 455 aaPredicted RBP8.31□□□□□ -1.08
CSMD1-206ENST00000520002 OR4E2Q8NGC2 313 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 OR10K1Q8NGX5 313 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 SLC45A3Q96JT2 553 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 ADAM18Q9Y3Q7 739 aa8.31□□□□□ -1.08
CSMD1-206ENST00000520002 FADS1O60427 444 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 OC90Q02509 493 aaPredicted RBP8.3□□□□□ -1.08
CSMD1-206ENST00000520002 GHRHRQ02643 423 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 PDGFRLQ15198 375 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 RAB11BQ15907 218 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 GPR22Q99680 433 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 OSBPL2Q9H1P3 480 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 ACSL6Q9UKU0 697 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 KCNS2Q9ULS6 477 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 MED1Q15648 1581 aaPredicted RBP8.3□□□□□ -1.08
CSMD1-206ENST00000520002 NID2Q14112 1375 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 ANKRD66B4E2M5 251 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 KRBOX1C9JBD0 128 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 NRP1O14786 923 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 ACPPP15309 386 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 HNF1BP35680 557 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 CASRP41180 1078 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 ZNF136P52737 540 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 UBE2KP61086 200 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 ARHGAP11AQ6P4F7 1023 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 NRROSQ86YC3 692 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 OR4K17Q8NGC6 315 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 OR52H1Q8NGJ2 320 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 SGTBQ96EQ0 304 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 MSLNLQ96KJ4 702 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 PIP5K1AQ99755 562 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 METTL7AQ9H8H3 244 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 GRHPRQ9UBQ7 328 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 CACNA1IQ9P0X4 2223 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 TRIP12Q14669 1992 aaPredicted RBP8.3□□□□□ -1.08
CSMD1-206ENST00000520002 PGGT1BP53609 377 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 LASP1Q14847 261 aaKnown RBP8.3□□□□□ -1.08
CSMD1-206ENST00000520002 ZNF792Q3KQV3 632 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 SLC22A18Q96BI1 424 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 RNF39Q9H2S5 420 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 DMAC2Q9NW81 257 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 DKKL1Q9UK85 242 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 COL14A1Q05707 1796 aaKnown RBP8.3□□□□□ -1.08
CSMD1-206ENST00000520002 SOCS7O14512 581 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 EOMESO95936 686 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 GNB3P16520 340 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 MEF2AQ02078 507 aaPredicted RBP8.3□□□□□ -1.08
CSMD1-206ENST00000520002 FOXB2Q5VYV0 432 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 C7orf43Q8WVR3 580 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 RAB8BQ92930 207 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 ACDQ96AP0 544 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 KLHL15Q96M94 604 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 PEBP4Q96S96 227 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 POLMQ9NP87 494 aaPredicted RBP8.3□□□□□ -1.08
CSMD1-206ENST00000520002 AHSGP02765 367 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 UGT2B10P36537 528 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 INHBCP55103 352 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 RPS26P62854 115 aaKnown RBP8.3□□□□□ -1.08
CSMD1-206ENST00000520002 KCNC4Q03721 635 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 SPHARQ15513 63 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 ENY2Q9NPA8 101 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 AHCTF1Q8WYP5 2266 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 CPED1A4D0V7 1026 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 LOC730098B7Z3J9 87 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 C7P10643 843 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 GP1BBP13224 206 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 DCKP27707 260 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 OXTRP30559 389 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 DIO3P55073 304 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 ARHGAP40Q5TG30 622 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 ZNF585AQ6P3V2 769 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 FAM111BQ6SJ93 734 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 FBXL12Q9NXK8 326 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 ALX3O95076 343 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 PPT1P50897 306 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 PLGLB1Q02325 96 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 C17orf107Q6ZR85 190 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 PHOSPHO1Q8TCT1 267 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 SLC25A18Q9H1K4 315 aa8.3□□□□□ -1.08
CSMD1-206ENST00000520002 PURGQ9UJV8 347 aaKnown RBP8.3□□□□□ -1.08
CSMD1-206ENST00000520002 INTS6Q9UL03 887 aaKnown RBP8.3□□□□□ -1.08
CSMD1-206ENST00000520002 CBSLP0DN79 551 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms