RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 FAM83FQ8NEG4 500 aaPredicted RBP11.34□□□□□ -0.59
CSMD1-205ENST00000519623 METTL6Q8TCB7 284 aa11.34□□□□□ -0.59
CSMD1-205ENST00000519623 ZNF675Q8TD23 568 aa11.34□□□□□ -0.59
CSMD1-205ENST00000519623 MTBPQ96DY7 904 aa11.34□□□□□ -0.59
CSMD1-205ENST00000519623 C11orf24Q96F05 449 aaPredicted RBP11.34□□□□□ -0.59
CSMD1-205ENST00000519623 ACPTQ9BZG2 426 aa11.34□□□□□ -0.59
CSMD1-205ENST00000519623 EPB41L4BQ9H329 900 aa11.34□□□□□ -0.59
CSMD1-205ENST00000519623 ANKRA2Q9H9E1 313 aa11.34□□□□□ -0.59
CSMD1-205ENST00000519623 CALHM2Q9HA72 323 aa11.34□□□□□ -0.59
CSMD1-205ENST00000519623 GALNT9Q9HCQ5 603 aa11.34□□□□□ -0.59
CSMD1-205ENST00000519623 DNAJB12Q9NXW2 375 aaKnown RBP11.34□□□□□ -0.59
CSMD1-205ENST00000519623 CRIM1Q9NZV1 1036 aa11.34□□□□□ -0.59
CSMD1-205ENST00000519623 PRODH2Q9UF12 536 aa11.34□□□□□ -0.59
CSMD1-205ENST00000519623 NFU1Q9UMS0 254 aa11.34□□□□□ -0.59
CSMD1-205ENST00000519623 EXO1Q9UQ84 846 aaKnown RBP11.34□□□□□ -0.59
CSMD1-205ENST00000519623 CAMK2AQ9UQM7 478 aa11.34□□□□□ -0.59
CSMD1-205ENST00000519623 HRNRQ86YZ3 2850 aaPredicted RBP11.34□□□□□ -0.59
CSMD1-205ENST00000519623 MBD3L4A6NDZ8 208 aaPredicted RBP11.33□□□□□ -0.6
CSMD1-205ENST00000519623 MBD3L3A6NE82 208 aaPredicted RBP11.33□□□□□ -0.6
CSMD1-205ENST00000519623 FRG2CA6NGY1 282 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 MBD3L5A6NJ08 208 aaPredicted RBP11.33□□□□□ -0.6
CSMD1-205ENST00000519623 NME6O75414 186 aaPredicted RBP11.33□□□□□ -0.6
CSMD1-205ENST00000519623 CBR3O75828 277 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 ACTL6AO96019 429 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 IL2RAP01589 272 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 IL3P08700 152 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 RHOXF2BP0C7M4 288 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 CT45A8P0DMV1 189 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 CT45A9P0DMV2 189 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 CPN1P15169 458 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 CD1EP15812 388 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 ATP5F1P24539 256 aaPredicted RBP11.33□□□□□ -0.6
CSMD1-205ENST00000519623 PEX19P40855 299 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 HTR6P50406 440 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 ASCL1P50553 236 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 ART1P52961 327 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 IST1P53990 364 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 PLCXD2Q0VAA5 305 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 CEBPEQ15744 281 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 CT45A2Q5DJT8 189 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 GPRIN3Q6ZVF9 776 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 TRMT10CQ7L0Y3 403 aaKnown RBP11.33□□□□□ -0.6
CSMD1-205ENST00000519623 GBP7Q8N8V2 638 aaPredicted RBP11.33□□□□□ -0.6
CSMD1-205ENST00000519623 MBD3L2Q8NHZ7 208 aaPredicted RBP11.33□□□□□ -0.6
CSMD1-205ENST00000519623 ZPLD1Q8TCW7 415 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 C16orf78Q8WTQ4 265 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 KAT2AQ92830 837 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 RNASE6Q93091 150 aaKnown RBP11.33□□□□□ -0.6
CSMD1-205ENST00000519623 TMBIM1Q969X1 311 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 ERP27Q96DN0 273 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 L3HYPDHQ96EM0 354 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 APIPQ96GX9 242 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 TRIB1Q96RU8 372 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 OSBPL11Q9BXB4 747 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 LIME1Q9H400 295 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 SERHLQ9NQF3 203 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 RASSF1Q9NS23 344 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 EHD3Q9NZN3 535 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 TIMM22Q9Y584 194 aa11.33□□□□□ -0.6
CSMD1-205ENST00000519623 ZFHX3Q15911 3703 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 MED12LQ86YW9 2145 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 SERTM1A2A2V5 107 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 OR6C70A6NIJ9 312 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 RIPK2O43353 540 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 PCDH7O60245 1069 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 REM1O75628 298 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 BCAS2O75934 225 aaPredicted RBP11.32□□□□□ -0.6
CSMD1-205ENST00000519623 ESRRBO95718 433 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 FAM153BP0C7A2 387 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 CTSSP25774 331 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 SLCO1A2P46721 670 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 AGFG1P52594 562 aaKnown RBP11.32□□□□□ -0.6
CSMD1-205ENST00000519623 HMGCS1Q01581 520 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 DAZAP2Q15038 168 aaPredicted RBP11.32□□□□□ -0.6
CSMD1-205ENST00000519623 PRSS53Q2L4Q9 553 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 FAM153CQ494X1 144 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 GALNT18Q6P9A2 607 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 ADGRE4PQ86SQ3 457 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 SLC22A9Q8IVM8 553 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 TRIM42Q8IWZ5 723 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 OR9A2Q8NGT5 310 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 MZB1Q8WU39 189 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 FAM222BQ8WU58 562 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 EXOSC8Q96B26 276 aaKnown RBP11.32□□□□□ -0.6
CSMD1-205ENST00000519623 SLC35A4Q96G79 324 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 VSTM2LQ96N03 204 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 COL21A1Q96P44 957 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 BTBD9Q96Q07 612 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 GPATCH1Q9BRR8 931 aaKnown RBP11.32□□□□□ -0.6
CSMD1-205ENST00000519623 POLDIP3Q9BY77 421 aaKnown RBP11.32□□□□□ -0.6
CSMD1-205ENST00000519623 TXLNGYQ9BZA5 131 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 OR2B2Q9GZK3 357 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 SLC35C2Q9NQQ7 365 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 SIRT5Q9NXA8 310 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 KLRF1Q9NZS2 232 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 JKAMPQ9P055 326 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 MAPRE3Q9UPY8 281 aa11.32□□□□□ -0.6
CSMD1-205ENST00000519623 ACANP16112 2415 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 PCNX3Q9H6A9 2034 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 GNG14A0A1W2PPG7 69 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms