RNA–Protein interactions for RNA: ENST00000518869.1

TMEM55A-203, humanhuman

TSL 5

Gene TMEM55A, Length 841 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-203ENST00000518869 R3HCC1LQ7Z5L2 792 aaKnown RBP12.14□□□□□ -0.47
TMEM55A-203ENST00000518869 KIRREL3Q8IZU9 778 aa12.14□□□□□ -0.47
TMEM55A-203ENST00000518869 MMP21Q8N119 569 aa12.14□□□□□ -0.47
TMEM55A-203ENST00000518869 OR5M9Q8NGP3 310 aa12.14□□□□□ -0.47
TMEM55A-203ENST00000518869 OR9A2Q8NGT5 310 aa12.14□□□□□ -0.47
TMEM55A-203ENST00000518869 AENQ8WTP8 325 aaKnown RBP12.14□□□□□ -0.47
TMEM55A-203ENST00000518869 COL21A1Q96P44 957 aa12.14□□□□□ -0.47
TMEM55A-203ENST00000518869 FAM111AQ96PZ2 611 aa12.14□□□□□ -0.47
TMEM55A-203ENST00000518869 BTBD9Q96Q07 612 aa12.14□□□□□ -0.47
TMEM55A-203ENST00000518869 SPOCK3Q9BQ16 436 aa12.14□□□□□ -0.47
TMEM55A-203ENST00000518869 TMEM109Q9BVC6 243 aa12.14□□□□□ -0.47
TMEM55A-203ENST00000518869 GATA5Q9BWX5 397 aaPredicted RBP12.14□□□□□ -0.47
TMEM55A-203ENST00000518869 ITPAQ9BY32 194 aa12.14□□□□□ -0.47
TMEM55A-203ENST00000518869 SDHAF3Q9NRP4 125 aa12.14□□□□□ -0.47
TMEM55A-203ENST00000518869 PNPLA3Q9NST1 481 aa12.14□□□□□ -0.47
TMEM55A-203ENST00000518869 COL12A1Q99715 3063 aa12.14□□□□□ -0.47
TMEM55A-203ENST00000518869 SPTAN1Q13813 2472 aaKnown RBP12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 ENO4A6NNW6 628 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 MYO1GB0I1T2 1018 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 PLOD2O00469 737 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 HPNP05981 417 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 MYZAPP0CAP1 466 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 SSTR2P30874 369 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 PEX19P40855 299 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 ZFP36L2P47974 494 aaKnown RBP12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 CDK9P50750 372 aaKnown RBP12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 PNLIPRP2P54317 469 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 MRPS35P82673 323 aaKnown RBP12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 DUSP8Q13202 625 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 PCLAFQ15004 111 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 VPS26BQ4G0F5 336 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 C1orf185Q5T7R7 199 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 LRIG3Q6UXM1 1119 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 MCEMP1Q8IX19 187 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 DDIASQ8IXT1 998 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 PRR22Q8IZ63 422 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 MREGQ8N565 214 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 NATD1Q8N6N6 113 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 OR2W6PQ8NHA6 318 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 CEP70Q8NHQ1 597 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 PPP1R14CQ8TAE6 165 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 TCP10LQ8TDR4 215 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 KAT2AQ92830 837 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 ZNF764Q96H86 408 aaPredicted RBP12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 PPP3R2Q96LZ3 170 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 GNRHR2Q96P88 292 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 TTYH2Q9BSA4 534 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 OSBPL11Q9BXB4 747 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 PROK2Q9HC23 129 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 DDX18Q9NVP1 670 aaKnown RBP12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 C15orf41Q9Y2V0 281 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 TRAF6Q9Y4K3 522 aa12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 POLR3HQ9Y535 204 aaPredicted RBP12.13□□□□□ -0.47
TMEM55A-203ENST00000518869 PRAMEF25A6NGN4 478 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 LRRC3CA6NJW4 275 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 HSPB2A8KAH6 182 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 RGS16O15492 202 aaPredicted RBP12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 CTIFO43310 598 aaKnown RBP12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 ICOSLGO75144 302 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 SOX30O94993 753 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 ACTL6AO96019 429 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 JUNP05412 331 aaKnown RBP12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 CELA3AP09093 270 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 RFPL3SP0C7P2 107 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 ALDH3A1P30838 453 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 GPC1P35052 558 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 LTB4RQ15722 352 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 HSPB2Q16082 182 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 NNATQ16517 81 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 DECR1Q16698 335 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 ARL13AQ5H913 290 aaPredicted RBP12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 EMC4Q5J8M3 183 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 KANK2Q63ZY3 851 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 CLEC6AQ6EIG7 209 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 FAM180BQ6P0A1 224 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 ENPP6Q6UWR7 440 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 ANGPTL8Q6UXH0 198 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 TMBIM1Q969X1 311 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 PPCDCQ96CD2 204 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 MTERF3Q96E29 417 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 ZBED6CLQ96FA7 236 aaPredicted RBP12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 SLC35A4Q96G79 324 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 PRPF18Q99633 342 aaKnown RBP12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 Q9N2J8 555 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 C19orf53Q9UNZ5 99 aaPredicted RBP12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 EXO1Q9UQ84 846 aaKnown RBP12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 RNF6Q9Y252 685 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 FIS1Q9Y3D6 152 aa12.12□□□□□ -0.47
TMEM55A-203ENST00000518869 ZNHIT1O43257 154 aa12.11□□□□□ -0.47
TMEM55A-203ENST00000518869 LINC00032P0C843 101 aa12.11□□□□□ -0.47
TMEM55A-203ENST00000518869 CT45A8P0DMV1 189 aa12.11□□□□□ -0.47
TMEM55A-203ENST00000518869 CT45A9P0DMV2 189 aa12.11□□□□□ -0.47
TMEM55A-203ENST00000518869 GRNP28799 593 aaKnown RBP12.11□□□□□ -0.47
TMEM55A-203ENST00000518869 MANFP55145 182 aaKnown RBP12.11□□□□□ -0.47
TMEM55A-203ENST00000518869 NUP107P57740 925 aa12.11□□□□□ -0.47
TMEM55A-203ENST00000518869 ZNF155Q12901 538 aaPredicted RBP12.11□□□□□ -0.47
TMEM55A-203ENST00000518869 RCAN2Q14206 197 aa12.11□□□□□ -0.47
TMEM55A-203ENST00000518869 KIAA0040Q15053 153 aa12.11□□□□□ -0.47
TMEM55A-203ENST00000518869 SLC25A35Q3KQZ1 300 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms