RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 B3GLCTQ6Y288 498 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 P2RY8Q86VZ1 359 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 STHQ8IWL8 128 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 PDCL2Q8N4E4 241 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 ARL14Q8N4G2 192 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 TRIML2Q8N7C3 387 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 ZNRF1Q8ND25 227 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 OR6M1Q8NGM8 313 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 OR4L1Q8NH43 312 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 AGR3Q8TD06 166 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 SLC5A11Q8WWX8 675 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 THRSPQ92748 146 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 GLYATL1Q969I3 302 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 MRPL24Q96A35 216 aaKnown RBP2.91□□□□□ -1.94
VPS13B-207ENST00000518569 ESAMQ96AP7 390 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 ARL5BQ96KC2 179 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 PRAM1Q96QH2 718 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 KCNK16Q96T55 309 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 FAM213AQ9BRX8 229 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 CAPS2Q9BXY5 557 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 NFKBIZQ9BYH8 718 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 CARD9Q9H257 536 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 SLC26A1Q9H2B4 701 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 PNNQ9H307 717 aaKnown RBP2.91□□□□□ -1.94
VPS13B-207ENST00000518569 TMEM245Q9H330 911 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 C8orf33Q9H7E9 229 aaPredicted RBP2.91□□□□□ -1.94
VPS13B-207ENST00000518569 NT5DC2Q9H857 520 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 CRLF2Q9HC73 371 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 DNAJC11Q9NVH1 559 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 TECRQ9NZ01 308 aaKnown RBP2.91□□□□□ -1.94
VPS13B-207ENST00000518569 HMG20BQ9P0W2 317 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 MTRF1LQ9UGC7 380 aaKnown RBP2.91□□□□□ -1.94
VPS13B-207ENST00000518569 MGAT4AQ9UM21 535 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 MRPS2Q9Y399 296 aaKnown RBP2.91□□□□□ -1.94
VPS13B-207ENST00000518569 SMAD5-AS1Q9Y6J3 95 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 STYXL1Q9Y6J8 313 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 GAKO14976 1311 aa2.91□□□□□ -1.94
VPS13B-207ENST00000518569 TOP2BQ02880 1626 aa2.9□□□□□ -1.94
VPS13B-207ENST00000518569 SHROOM2Q13796 1616 aa2.9□□□□□ -1.94
VPS13B-207ENST00000518569 ADCY10Q96PN6 1610 aa2.9□□□□□ -1.94
VPS13B-207ENST00000518569 BRD4O60885 1362 aaPredicted RBP2.9□□□□□ -1.94
VPS13B-207ENST00000518569 NSD2O96028 1365 aa2.9□□□□□ -1.94
VPS13B-207ENST00000518569 C5orf51A6NDU8 294 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 RPL37AP8A6NKH3 93 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 SRRM5B3KS81 715 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 E9PBE3 544 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 H0Y8G0 127 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 CHEK1O14757 476 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 RASGRF2O14827 1237 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 CASC3O15234 703 aaKnown RBP2.9□□□□□ -1.95
VPS13B-207ENST00000518569 RNF113AO15541 343 aaKnown RBP2.9□□□□□ -1.95
VPS13B-207ENST00000518569 TSPAN2O60636 221 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 SH3BGRLO75368 114 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 ZNF254O75437 659 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 IDH1O75874 414 aaKnown RBP2.9□□□□□ -1.95
VPS13B-207ENST00000518569 BCAS2O75934 225 aaPredicted RBP2.9□□□□□ -1.95
VPS13B-207ENST00000518569 SEMA4FO95754 770 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 RENP00797 406 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 NPPAP01160 153 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 MT-ND1P03886 318 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 ASGR1P07306 291 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 POLR2MP0CAP2 368 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 TPBGLP0DKB5 382 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 CCDC130P13994 396 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 B4GALT1P15291 398 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 FOSL2P15408 326 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 CCT6AP40227 531 aaKnown RBP2.9□□□□□ -1.95
VPS13B-207ENST00000518569 ELK3P41970 407 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 SMSP52788 366 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 ATXN3P54252 364 aaPredicted RBP2.9□□□□□ -1.95
VPS13B-207ENST00000518569 ATP5IP56385 69 aaPredicted RBP2.9□□□□□ -1.95
VPS13B-207ENST00000518569 PRKCEQ02156 737 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 TSTA3Q13630 321 aaPredicted RBP2.9□□□□□ -1.95
VPS13B-207ENST00000518569 PDE7AQ13946 482 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 DPYSL2Q16555 572 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 CLPPQ16740 277 aaPredicted RBP2.9□□□□□ -1.95
VPS13B-207ENST00000518569 HADHQ16836 314 aaKnown RBP2.9□□□□□ -1.95
VPS13B-207ENST00000518569 C15orf32Q32M92 178 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 ZNF506Q5JVG8 444 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 DDI2Q5TDH0 399 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 METTL11BQ5VVY1 283 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 LIPJQ5W064 366 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 SEL1L3Q68CR1 1132 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 C8orf74Q6P047 294 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 Q6ZRG5 221 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 RBM43Q6ZSC3 357 aaKnown RBP2.9□□□□□ -1.95
VPS13B-207ENST00000518569 ITIH5Q86UX2 942 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 SLC39A11Q8N1S5 342 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 BBS5Q8N3I7 341 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 SAMD12Q8N8I0 201 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 ICA1LQ8NDH6 482 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 OR1K1Q8NGR3 316 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 URGCPQ8TCY9 931 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 RNASE8Q8TDE3 154 aaKnown RBP2.9□□□□□ -1.95
VPS13B-207ENST00000518569 C19orf60Q96EN9 201 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 C11orf24Q96F05 449 aaPredicted RBP2.9□□□□□ -1.95
VPS13B-207ENST00000518569 CAPNS2Q96L46 248 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 CATSPER2Q96P56 530 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 DCTN5Q9BTE1 182 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 SPZ1Q9BXG8 430 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms