RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 GPC1P35052 558 aa17.14■□□□□ 0.33
FAM49B-208ENST00000518344 HPCAL1P37235 193 aa17.14■□□□□ 0.33
FAM49B-208ENST00000518344 MANFP55145 182 aaKnown RBP17.14■□□□□ 0.33
FAM49B-208ENST00000518344 WDR4P57081 412 aaKnown RBP17.14■□□□□ 0.33
FAM49B-208ENST00000518344 CORO7P57737 925 aa17.14■□□□□ 0.33
FAM49B-208ENST00000518344 BST1Q10588 318 aa17.14■□□□□ 0.33
FAM49B-208ENST00000518344 ZNF155Q12901 538 aaPredicted RBP17.14■□□□□ 0.33
FAM49B-208ENST00000518344 HSPB3Q12988 150 aa17.14■□□□□ 0.33
FAM49B-208ENST00000518344 SLC10A1Q14973 349 aa17.14■□□□□ 0.33
FAM49B-208ENST00000518344 ZNF385BQ569K4 471 aa17.14■□□□□ 0.33
FAM49B-208ENST00000518344 CT45A2Q5DJT8 189 aa17.14■□□□□ 0.33
FAM49B-208ENST00000518344 TBCELQ5QJ74 424 aa17.14■□□□□ 0.33
FAM49B-208ENST00000518344 TMEM198Q66K66 360 aa17.14■□□□□ 0.33
FAM49B-208ENST00000518344 Q6ZPB1 254 aaPredicted RBP17.14■□□□□ 0.33
FAM49B-208ENST00000518344 NUP54Q7Z3B4 507 aa17.14■□□□□ 0.33
FAM49B-208ENST00000518344 R3HCC1LQ7Z5L2 792 aaKnown RBP17.14■□□□□ 0.33
FAM49B-208ENST00000518344 CHERPQ8IWX8 916 aaKnown RBP17.14■□□□□ 0.33
FAM49B-208ENST00000518344 SLC34A3Q8N130 599 aa17.14■□□□□ 0.33
FAM49B-208ENST00000518344 FAM109AQ8N4B1 249 aa17.14■□□□□ 0.33
FAM49B-208ENST00000518344 TMBIM1Q969X1 311 aa17.14■□□□□ 0.33
FAM49B-208ENST00000518344 TLCD1Q96CP7 247 aa17.14■□□□□ 0.33
FAM49B-208ENST00000518344 ELP4Q96EB1 424 aa17.14■□□□□ 0.33
FAM49B-208ENST00000518344 VSTM2LQ96N03 204 aa17.14■□□□□ 0.33
FAM49B-208ENST00000518344 SECISBP2Q96T21 854 aaKnown RBP17.14■□□□□ 0.33
FAM49B-208ENST00000518344 METTL7AQ9H8H3 244 aa17.14■□□□□ 0.33
FAM49B-208ENST00000518344 ZDHHC11Q9H8X9 412 aa17.14■□□□□ 0.33
FAM49B-208ENST00000518344 C19orf53Q9UNZ5 99 aaPredicted RBP17.14■□□□□ 0.33
FAM49B-208ENST00000518344 EIF3LQ9Y262 564 aaKnown RBP17.14■□□□□ 0.33
FAM49B-208ENST00000518344 ANKRD33BA6NCL7 494 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 UPK1AO00322 258 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 PLOD2O00469 737 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 TBX19O60806 448 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 REM1O75628 298 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 SNUPNO95149 360 aaKnown RBP17.13■□□□□ 0.33
FAM49B-208ENST00000518344 TPOP07202 933 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 CELA3AP09093 270 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 RFPL3SP0C7P2 107 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 PRPS2P11908 318 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 CASP3P42574 277 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 MASP1P48740 699 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 PTGR1Q14914 329 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 HYAL4Q2M3T9 481 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 ARHGAP11AQ6P4F7 1023 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 NPSR1Q6W5P4 371 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 PACS2Q86VP3 889 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 DOLPP1Q86YN1 238 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 SLC44A2Q8IWA5 706 aaPredicted RBP17.13■□□□□ 0.33
FAM49B-208ENST00000518344 ZFP28Q8NHY6 868 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 MTERF3Q96E29 417 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 ZBED6CLQ96FA7 236 aaPredicted RBP17.13■□□□□ 0.33
FAM49B-208ENST00000518344 RILPQ96NA2 401 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 BTBD9Q96Q07 612 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 SORT1Q99523 831 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 ANGPTL4Q9BY76 406 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 LDAHQ9H6V9 325 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 PNPOQ9NVS9 261 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 PLEKHB1Q9UF11 243 aaPredicted RBP17.13■□□□□ 0.33
FAM49B-208ENST00000518344 OR10H1Q9Y4A9 318 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 LIPGQ9Y5X9 500 aa17.13■□□□□ 0.33
FAM49B-208ENST00000518344 TO15178 435 aa17.12■□□□□ 0.33
FAM49B-208ENST00000518344 UGT2B11O75310 529 aa17.12■□□□□ 0.33
FAM49B-208ENST00000518344 TRIM3O75382 744 aaPredicted RBP17.12■□□□□ 0.33
FAM49B-208ENST00000518344 GP1BBP13224 206 aa17.12■□□□□ 0.33
FAM49B-208ENST00000518344 DDX5P17844 614 aaKnown RBP17.12■□□□□ 0.33
FAM49B-208ENST00000518344 EFNA1P20827 205 aaPredicted RBP17.12■□□□□ 0.33
FAM49B-208ENST00000518344 KRT20P35900 424 aa17.12■□□□□ 0.33
FAM49B-208ENST00000518344 SLC18A1P54219 525 aa17.12■□□□□ 0.33
FAM49B-208ENST00000518344 PDE7AQ13946 482 aa17.12■□□□□ 0.33
FAM49B-208ENST00000518344 C3P1Q6ZMU1 363 aa17.12■□□□□ 0.33
FAM49B-208ENST00000518344 OR2L13Q8N349 312 aa17.12■□□□□ 0.33
FAM49B-208ENST00000518344 OR7A2PQ8NGA2 310 aa17.12■□□□□ 0.33
FAM49B-208ENST00000518344 OR4N2Q8NGD1 307 aa17.12■□□□□ 0.33
FAM49B-208ENST00000518344 HGDQ93099 445 aa17.12■□□□□ 0.33
FAM49B-208ENST00000518344 ZNF764Q96H86 408 aaPredicted RBP17.12■□□□□ 0.33
FAM49B-208ENST00000518344 CCDC120Q96HB5 630 aa17.12■□□□□ 0.33
FAM49B-208ENST00000518344 ZNF597Q96LX8 424 aa17.12■□□□□ 0.33
FAM49B-208ENST00000518344 NODALQ96S42 347 aa17.12■□□□□ 0.33
FAM49B-208ENST00000518344 ADOQ96SZ5 270 aa17.12■□□□□ 0.33
FAM49B-208ENST00000518344 EXO5Q9H790 373 aa17.12■□□□□ 0.33
FAM49B-208ENST00000518344 AKTIPQ9H8T0 292 aa17.12■□□□□ 0.33
FAM49B-208ENST00000518344 PLSCR2Q9NRY7 297 aa17.12■□□□□ 0.33
FAM49B-208ENST00000518344 B4GALT7Q9UBV7 327 aa17.12■□□□□ 0.33
FAM49B-208ENST00000518344 LRRC3CA6NJW4 275 aa17.11■□□□□ 0.33
FAM49B-208ENST00000518344 NPIPA2E9PIF3 369 aa17.11■□□□□ 0.33
FAM49B-208ENST00000518344 NPIPA3F8WFD2 350 aa17.11■□□□□ 0.33
FAM49B-208ENST00000518344 SCAMP2O15127 329 aaKnown RBP17.11■□□□□ 0.33
FAM49B-208ENST00000518344 SNX4O95219 450 aa17.11■□□□□ 0.33
FAM49B-208ENST00000518344 IL12BP29460 328 aa17.11■□□□□ 0.33
FAM49B-208ENST00000518344 RPL3P39023 403 aaKnown RBP17.11■□□□□ 0.33
FAM49B-208ENST00000518344 PRKAG1P54619 331 aa17.11■□□□□ 0.33
FAM49B-208ENST00000518344 EMX2Q04743 252 aa17.11■□□□□ 0.33
FAM49B-208ENST00000518344 MAD2L1Q13257 205 aaPredicted RBP17.11■□□□□ 0.33
FAM49B-208ENST00000518344 ZNHIT3Q15649 155 aaPredicted RBP17.11■□□□□ 0.33
FAM49B-208ENST00000518344 CPTPQ5TA50 214 aa17.11■□□□□ 0.33
FAM49B-208ENST00000518344 AGBL2Q5U5Z8 902 aa17.11■□□□□ 0.33
FAM49B-208ENST00000518344 MTFR2Q6P444 385 aa17.11■□□□□ 0.33
FAM49B-208ENST00000518344 SZRD1Q7Z422 152 aa17.11■□□□□ 0.33
FAM49B-208ENST00000518344 WDR53Q7Z5U6 358 aaPredicted RBP17.11■□□□□ 0.33
FAM49B-208ENST00000518344 CD163Q86VB7 1156 aa17.11■□□□□ 0.33
FAM49B-208ENST00000518344 KIRREL3Q8IZU9 778 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms