RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 PRKAG1P54619 331 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 KCNK10P57789 538 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 RCAN2Q14206 197 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 INAQ16352 499 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 ZNF791Q3KP31 576 aaPredicted RBP10.99□□□□□ -0.65
SNF8-215ENST00000515572 PLEKHN1Q494U1 663 aaPredicted RBP10.99□□□□□ -0.65
SNF8-215ENST00000515572 ZNF468Q5VIY5 522 aaPredicted RBP10.99□□□□□ -0.65
SNF8-215ENST00000515572 MFSD12Q6NUT3 480 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 RPUSD3Q6P087 351 aaKnown RBP10.99□□□□□ -0.65
SNF8-215ENST00000515572 PAOXQ6QHF9 649 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 IL20RBQ6UXL0 311 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 SZRD1Q7Z422 152 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 ANKRD46Q86W74 232 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 PTRH1Q86Y79 214 aaKnown RBP10.99□□□□□ -0.65
SNF8-215ENST00000515572 CPSF7Q8N684 471 aaKnown RBP10.99□□□□□ -0.65
SNF8-215ENST00000515572 TRIML2Q8N7C3 387 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 OR9I1Q8NGQ6 314 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 GOT1L1Q8NHS2 421 aaPredicted RBP10.99□□□□□ -0.65
SNF8-215ENST00000515572 HOXB13Q92826 284 aaPredicted RBP10.99□□□□□ -0.65
SNF8-215ENST00000515572 FAM120BQ96EK7 910 aaKnown RBP10.99□□□□□ -0.65
SNF8-215ENST00000515572 SCMH1Q96GD3 660 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 SIGLEC12Q96PQ1 595 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 PANX1Q96RD7 426 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 MFRPQ9BY79 579 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 ZNF385DQ9H6B1 395 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 CXorf36Q9H7Y0 433 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 Q9N2J8 555 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 CCDC167Q9P0B6 97 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 NPFFR2Q9Y5X5 522 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 CNTRLQ7Z7A1 2325 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 ZFYVE26Q68DK2 2539 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 TLN1Q9Y490 2541 aaKnown RBP10.98□□□□□ -0.65
SNF8-215ENST00000515572 CHD6Q8TD26 2715 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 RNF103-CHMP3A0A140T963 221 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 CCDC154A6NI56 674 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 C9JVG2 144 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 NME2P1O60361 137 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 ZNF354AO60765 605 aaPredicted RBP10.98□□□□□ -0.65
SNF8-215ENST00000515572 ABCB7O75027 752 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 SLC25A12O75746 678 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 SORBS2O94875 1100 aaKnown RBP10.98□□□□□ -0.65
SNF8-215ENST00000515572 SP1P08047 785 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 CT45A8P0DMV1 189 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 CT45A9P0DMV2 189 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 NME2P22392 152 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 UQCRC2P22695 453 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 ABCD3P28288 659 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 ADSLP30566 484 aaPredicted RBP10.98□□□□□ -0.65
SNF8-215ENST00000515572 KRT20P35900 424 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 ZFP36L2P47974 494 aaKnown RBP10.98□□□□□ -0.65
SNF8-215ENST00000515572 CORO7P57737 925 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 RPP38P78345 283 aaKnown RBP10.98□□□□□ -0.65
SNF8-215ENST00000515572 PSG6Q00889 435 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 NNATQ16517 81 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 NTRK2Q16620 822 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 MAPKAPK3Q16644 382 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 CYP27C1Q4G0S4 372 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 TIGD2Q4W5G0 525 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 CT45A2Q5DJT8 189 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 ZNF766Q5HY98 468 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 SPINK14Q6IE38 97 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 SLC25A25Q6KCM7 469 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 BLOC1S3Q6QNY0 202 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 LYPD8Q6UX82 237 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 SPATA21Q7Z572 469 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 CPLX4Q7Z7G2 160 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 FUNDC1Q8IVP5 155 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 SLC44A2Q8IWA5 706 aaPredicted RBP10.98□□□□□ -0.65
SNF8-215ENST00000515572 SLC34A3Q8N130 599 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 Q8NA96 180 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 FAM98AQ8NCA5 519 aaKnown RBP10.98□□□□□ -0.65
SNF8-215ENST00000515572 TSPEARQ8WU66 669 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 C10orf82Q8WW14 230 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 GIMAP5Q96F15 307 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 ITCHQ96J02 903 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 TIMMDC1Q9NPL8 285 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 EQTNQ9NQ60 294 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 GIN1Q9NXP7 522 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 CNIH4Q9P003 139 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 MRTO4Q9UKD2 239 aaKnown RBP10.98□□□□□ -0.65
SNF8-215ENST00000515572 VPS4AQ9UN37 437 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 FAF1Q9UNN5 650 aaPredicted RBP10.98□□□□□ -0.65
SNF8-215ENST00000515572 KLF13Q9Y2Y9 288 aaPredicted RBP10.98□□□□□ -0.65
SNF8-215ENST00000515572 OR10H1Q9Y4A9 318 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 PCDHGA10Q9Y5H3 936 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 COL6A6A6NMZ7 2263 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 ATRXP46100 2492 aa10.98□□□□□ -0.65
SNF8-215ENST00000515572 B8ZZF3 427 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 NR5A2O00482 541 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 RFXANKO14593 260 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 TP53I11O14683 189 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 SUV39H1O43463 412 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 PPM1BO75688 479 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 NKX2-2O95096 273 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 CPSF4O95639 269 aaKnown RBP10.97□□□□□ -0.65
SNF8-215ENST00000515572 HMGN2P05204 90 aaKnown RBP10.97□□□□□ -0.65
SNF8-215ENST00000515572 ALOX5P09917 674 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 ZCCHC18P0CG32 403 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 DRD4P21917 467 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms