RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 CAMK2AQ9UQM7 478 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 CRYBG3Q68DQ2 2970 aa12.5□□□□□ -0.41
TCOF1-215ENST00000515516 PRAMEF25A6NGN4 478 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 TO15178 435 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 ABCB7O75027 752 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 ICOSLGO75144 302 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 IL2RAP01589 272 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 SHBGP04278 402 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 CPA3P15088 417 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 DDCP20711 480 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 IL12BP29460 328 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 ADH7P40394 386 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 MRPS22P82650 360 aaKnown RBP12.49□□□□□ -0.41
TCOF1-215ENST00000515516 CRYZQ08257 329 aaKnown RBP12.49□□□□□ -0.41
TCOF1-215ENST00000515516 ZNF763Q0D2J5 394 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 MYBPHQ13203 477 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 EFR3AQ14156 821 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 EIPR1Q53HC9 387 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 TMEM81Q6P7N7 255 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 TDRPQ86YL5 185 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 LACC1Q8IV20 430 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 SIMC1Q8NDZ2 872 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 FAM76AQ8TAV0 307 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.49□□□□□ -0.41
TCOF1-215ENST00000515516 HGDQ93099 445 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 ABTB1Q969K4 478 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-215ENST00000515516 TMBIM1Q969X1 311 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 NODALQ96S42 347 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 IQCGQ9H095 443 aaKnown RBP12.49□□□□□ -0.41
TCOF1-215ENST00000515516 STMN4Q9H169 189 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-215ENST00000515516 UBQLN3Q9H347 655 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 SIRT5Q9NXA8 310 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 TAS2R9Q9NYW1 312 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 KCNN3Q9UGI6 736 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 GPR55Q9Y2T6 319 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-215ENST00000515516 WBP11Q9Y2W2 641 aaKnown RBP12.49□□□□□ -0.41
TCOF1-215ENST00000515516 SLC6A5Q9Y345 797 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 OR10H1Q9Y4A9 318 aa12.49□□□□□ -0.41
TCOF1-215ENST00000515516 C2orf72A6NCS6 295 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 OR6C70A6NIJ9 312 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 UBFD1O14562 309 aaKnown RBP12.48□□□□□ -0.41
TCOF1-215ENST00000515516 DVL2O14641 736 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 SNPHO15079 494 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 PLIN3O60664 434 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 COQ9O75208 318 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 UGT2B11O75310 529 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 ERN1O75460 977 aaKnown RBP12.48□□□□□ -0.41
TCOF1-215ENST00000515516 CBR3O75828 277 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 RSL1D1O76021 490 aaKnown RBP12.48□□□□□ -0.41
TCOF1-215ENST00000515516 EPPINO95925 133 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 UROSP10746 265 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 IGFBP2P18065 325 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 BMP7P18075 431 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 KRT4P19013 534 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 PTPN6P29350 595 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 NTSP30990 170 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 NCBP2P52298 156 aaKnown RBP eCLIP12.48□□□□□ -0.411e-8■■□□□ 13.6
TCOF1-215ENST00000515516 FOXA1P55317 472 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 RCAN2Q14206 197 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 ACSF3Q4G176 576 aaPredicted RBP12.48□□□□□ -0.41
TCOF1-215ENST00000515516 NHSL2Q5HYW2 709 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 WIPI1Q5MNZ9 446 aaPredicted RBP12.48□□□□□ -0.41
TCOF1-215ENST00000515516 FNDC7Q5VTL7 733 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 LIPMQ5VYY2 423 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 VASNQ6EMK4 673 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 FRMD7Q6ZUT3 714 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 TRIM46Q7Z4K8 759 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 YRDCQ86U90 279 aaKnown RBP12.48□□□□□ -0.41
TCOF1-215ENST00000515516 LIX1LQ8IVB5 337 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 FAM83FQ8NEG4 500 aaPredicted RBP12.48□□□□□ -0.41
TCOF1-215ENST00000515516 OR14L1PQ8NHC6 308 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 BTBD9Q96Q07 612 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 ADOQ96SZ5 270 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 OXSMQ9NWU1 459 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 MAPRE3Q9UPY8 281 aa12.48□□□□□ -0.41
TCOF1-215ENST00000515516 EXO1Q9UQ84 846 aaKnown RBP12.48□□□□□ -0.41
TCOF1-215ENST00000515516 NCOA6Q14686 2063 aaPredicted RBP12.48□□□□□ -0.41
TCOF1-215ENST00000515516 TLDC2A0PJX2 215 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 SLC28A1O00337 649 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 RGS14O43566 566 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 PLOD3O60568 738 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 SEC22BO75396 215 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 SLITRK5O94991 958 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 ZWINTO95229 277 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 CHEK2O96017 543 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 ACTL6AO96019 429 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 BMP5P22003 454 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 TIMP3P35625 211 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 PEX19P40855 299 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 ZNF155Q12901 538 aaPredicted RBP12.47□□□□□ -0.41
TCOF1-215ENST00000515516 DESI1Q6ICB0 168 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 ARSKQ6UWY0 536 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 SH2D5Q6ZV89 423 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 LARP4Q71RC2 724 aaKnown RBP eCLIP12.47□□□□□ -0.41
TCOF1-215ENST00000515516 TMEM200AQ86VY9 491 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 SLC44A2Q8IWA5 706 aaPredicted RBP12.47□□□□□ -0.41
TCOF1-215ENST00000515516 HOMEZQ8IX15 550 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 LRRN4CLQ8ND94 238 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 EPS8L3Q8TE67 593 aaKnown RBP12.47□□□□□ -0.41
TCOF1-215ENST00000515516 C11orf24Q96F05 449 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms