RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 CPAMD8Q8IZJ3 1885 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 C15orf38-AP3S2A0A0A6YYH1 394 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 PRKNO60260 465 aaPredicted RBP19.44■□□□□ 0.7
LSM6-207ENST00000515311 DRD5P21918 477 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 ITGA3P26006 1051 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 MAN2A2P49641 1150 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 ANXA11P50995 505 aaKnown RBP19.44■□□□□ 0.7
LSM6-207ENST00000515311 MVDP53602 400 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 CAPRIN1Q14444 709 aaKnown RBP19.44■□□□□ 0.7
LSM6-207ENST00000515311 IRAK1BP1Q5VVH5 260 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 ANGPTL8Q6UXH0 198 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 GPR155Q7Z3F1 870 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 ARPINQ7Z6K5 226 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 RNF130Q86XS8 419 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 OR8J3Q8NGG0 315 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 OR52N2Q8NGI0 321 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 PSMF1Q92530 271 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 C16orf58Q96GQ5 468 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 GAL3ST4Q96RP7 486 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 SH3GL1Q99961 368 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 HOPXQ9BPY8 73 aaPredicted RBP19.44■□□□□ 0.7
LSM6-207ENST00000515311 GPATCH1Q9BRR8 931 aaKnown RBP19.44■□□□□ 0.7
LSM6-207ENST00000515311 SLC39A3Q9BRY0 314 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 NDE1Q9NXR1 346 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 MYOTQ9UBF9 498 aa19.44■□□□□ 0.7
LSM6-207ENST00000515311 FRG2CA6NGY1 282 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 TMEM200CA6NKL6 621 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 DUXAA6NLW8 204 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 EVPLLA8MZ36 301 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 EBAG9O00559 213 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 ASNA1O43681 348 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 NME6O75414 186 aaPredicted RBP19.43■□□□□ 0.7
LSM6-207ENST00000515311 UNC5CO95185 931 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 C1QCP02747 245 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 CT45A8P0DMV1 189 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 CT45A9P0DMV2 189 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 MATN1P21941 496 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 KHKP50053 298 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 PSG6Q00889 435 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 FADDQ13158 208 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 CT45A2Q5DJT8 189 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 NANOGP8Q6NSW7 305 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 PNPT1Q8TCS8 783 aaKnown RBP19.43■□□□□ 0.7
LSM6-207ENST00000515311 BRIX1Q8TDN6 353 aaKnown RBP19.43■□□□□ 0.7
LSM6-207ENST00000515311 APOBEC4Q8WW27 367 aaKnown RBP19.43■□□□□ 0.7
LSM6-207ENST00000515311 LCORQ96JN0 433 aaPredicted RBP19.43■□□□□ 0.7
LSM6-207ENST00000515311 STACQ99469 402 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 SERHL2Q9H4I8 314 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 NANOGQ9H9S0 305 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 DUSP22Q9NRW4 184 aa19.43■□□□□ 0.7
LSM6-207ENST00000515311 ACOX3O15254 700 aa19.42■□□□□ 0.7
LSM6-207ENST00000515311 CEACAM4O75871 244 aa19.42■□□□□ 0.7
LSM6-207ENST00000515311 NKX2-2O95096 273 aa19.42■□□□□ 0.7
LSM6-207ENST00000515311 AGR2O95994 175 aa19.42■□□□□ 0.7
LSM6-207ENST00000515311 ALOX5P09917 674 aa19.42■□□□□ 0.7
LSM6-207ENST00000515311 ACP2P11117 423 aa19.42■□□□□ 0.7
LSM6-207ENST00000515311 GPX2P18283 190 aa19.42■□□□□ 0.7
LSM6-207ENST00000515311 SLC6A2P23975 617 aa19.42■□□□□ 0.7
LSM6-207ENST00000515311 CORO7P57737 925 aa19.42■□□□□ 0.7
LSM6-207ENST00000515311 RPS26P62854 115 aaKnown RBP19.42■□□□□ 0.7
LSM6-207ENST00000515311 BNIP1Q12981 228 aa19.42■□□□□ 0.7
LSM6-207ENST00000515311 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.42■□□□□ 0.7
LSM6-207ENST00000515311 TCTN3Q6NUS6 607 aa19.42■□□□□ 0.7
LSM6-207ENST00000515311 RPS19BP1Q86WX3 136 aaKnown RBP19.42■□□□□ 0.7
LSM6-207ENST00000515311 SLC16A11Q8NCK7 471 aa19.42■□□□□ 0.7
LSM6-207ENST00000515311 JADE3Q92613 823 aa19.42■□□□□ 0.7
LSM6-207ENST00000515311 YIPF4Q9BSR8 244 aa19.42■□□□□ 0.7
LSM6-207ENST00000515311 NXF5Q9H1B4 397 aaKnown RBP19.42■□□□□ 0.7
LSM6-207ENST00000515311 PIGUQ9H490 435 aa19.42■□□□□ 0.7
LSM6-207ENST00000515311 IKZF5Q9H5V7 419 aa19.42■□□□□ 0.7
LSM6-207ENST00000515311 THUMPD1Q9NXG2 353 aaKnown RBP19.42■□□□□ 0.7
LSM6-207ENST00000515311 TEKT2Q9UIF3 430 aa19.42■□□□□ 0.7
LSM6-207ENST00000515311 A8MUI8 341 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 B2RBV5 119 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 TO15178 435 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 HNRNPCL1O60812 293 aaKnown RBP19.41■□□□□ 0.7
LSM6-207ENST00000515311 DNAJB5O75953 348 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 BMP2P12643 396 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 MLF1P58340 268 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 MTPNP58546 118 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 CXADRP78310 365 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 MXRA7P84157 204 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 RGNQ15493 299 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 DUSP5Q16690 384 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 CRB2Q5IJ48 1285 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 COX20Q5RI15 118 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 BORAQ6PGQ7 559 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 NPSR1Q6W5P4 371 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 WDR53Q7Z5U6 358 aaPredicted RBP19.41■□□□□ 0.7
LSM6-207ENST00000515311 SLC44A2Q8IWA5 706 aaPredicted RBP19.41■□□□□ 0.7
LSM6-207ENST00000515311 SLC15A4Q8N697 577 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 FBXO27Q8NI29 283 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 ADAMTS15Q8TE58 950 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 THAP3Q8WTV1 239 aaPredicted RBP19.41■□□□□ 0.7
LSM6-207ENST00000515311 SLC9A6Q92581 669 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 HSPBAP1Q96EW2 488 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 ZNF354BQ96LW1 612 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 OR7D2Q96RA2 312 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 THUMPD3Q9BV44 507 aaKnown RBP19.41■□□□□ 0.7
LSM6-207ENST00000515311 C1orf21Q9H246 121 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms