RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 PLEKHG7Q6ZR37 379 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 RRM2BQ7LG56 351 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 BTLAQ7Z6A9 289 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 IQCHQ86VS3 1027 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 COMTD1Q86VU5 262 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 ATCAYQ86WG3 371 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 SLC34A3Q8N130 599 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 NANOGP1Q8N7R0 232 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 CAMKVQ8NCB2 501 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 OR4K14Q8NGD5 310 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 OR9A2Q8NGT5 310 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 TEX47Q8TBZ9 253 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 ITPKCQ96DU7 683 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 C16orf58Q96GQ5 468 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 SMIM10Q96HG1 83 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 SLC38A2Q96QD8 506 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 OR5M11Q96RB7 305 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 WFDC6Q9BQY6 131 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 CDADC1Q9BWV3 514 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 TSSK6Q9BXA6 273 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 SLC6A17Q9H1V8 727 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 S1PR5Q9H228 398 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 MTHFD2LQ9H903 347 aaPredicted RBP13.95□□□□□ -0.18
NUP54-217ENST00000514987 SLC28A3Q9HAS3 691 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 MRPS18AQ9NVS2 196 aaKnown RBP13.95□□□□□ -0.18
NUP54-217ENST00000514987 TRNAU1APQ9NX07 287 aaKnown RBP13.95□□□□□ -0.18
NUP54-217ENST00000514987 TVP23BQ9NYZ1 205 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 DNAJC27Q9NZQ0 273 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 PTGFRNQ9P2B2 879 aa13.95□□□□□ -0.18
NUP54-217ENST00000514987 ZNF624Q9P2J8 865 aaPredicted RBP13.95□□□□□ -0.18
NUP54-217ENST00000514987 DIMT1Q9UNQ2 313 aaKnown RBP13.95□□□□□ -0.18
NUP54-217ENST00000514987 LSM2Q9Y333 95 aaKnown RBP13.95□□□□□ -0.18
NUP54-217ENST00000514987 NINQ8N4C6 2090 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.94□□□□□ -0.18
NUP54-217ENST00000514987 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.94□□□□□ -0.18
NUP54-217ENST00000514987 FAM221BA6H8Z2 402 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 LRRC72A6NJI9 287 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 BTN3A3O00478 584 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 DSCR3O14972 297 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 B3GALT2O43825 422 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 KIAA0513O60268 411 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 UPK1BO75841 260 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 MED26O95402 600 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 RAB36O95755 333 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 EGFP01133 1207 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 IFI6P09912 130 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 CCNYL3P0C7X3 344 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 C8orf89P0DMQ9 161 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 GRK5P34947 590 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 ETV6P41212 452 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 ACTR1BP42025 376 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 CD97P48960 835 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 PSMD7P51665 324 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 ACTR1AP61163 376 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 MLLT11Q13015 90 aaPredicted RBP13.94□□□□□ -0.18
NUP54-217ENST00000514987 ADAM15Q13444 863 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 ZNF750Q32MQ0 723 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 PERM1Q5SV97 790 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 MRGPREQ86SM8 312 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 CYP4Z2PQ8N1L4 340 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 OTUB1Q96FW1 271 aaPredicted RBP13.94□□□□□ -0.18
NUP54-217ENST00000514987 C10orf90Q96M02 699 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 OPALINQ96PE5 141 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 POLR2J2Q9GZM3 115 aaKnown RBP13.94□□□□□ -0.18
NUP54-217ENST00000514987 C6orf62Q9GZU0 229 aaPredicted RBP13.94□□□□□ -0.18
NUP54-217ENST00000514987 SP140LQ9H930 580 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 ENTPD2Q9Y5L3 495 aa13.94□□□□□ -0.18
NUP54-217ENST00000514987 A0A075B6Q4 140 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 A6NCN8 305 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 EPOPA6NHQ4 379 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 AP3D1O14617 1153 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 MYL12BO14950 172 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 TLX2O43763 284 aaPredicted RBP13.93□□□□□ -0.18
NUP54-217ENST00000514987 ALPPL2P10696 532 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 PORP16435 677 aaPredicted RBP13.93□□□□□ -0.18
NUP54-217ENST00000514987 TGM1P22735 817 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 PSMA1P25786 263 aaKnown RBP13.93□□□□□ -0.18
NUP54-217ENST00000514987 AKT2P31751 481 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 TGFBR1P36897 503 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 STAT5AP42229 794 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 CLDN2P57739 230 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 COPZ1P61923 177 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 EFNB1P98172 346 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 CHRNEQ04844 493 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 DECR1Q16698 335 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 PRRT3Q5FWE3 981 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 MANEAQ5SRI9 462 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 MFSD12Q6NUT3 480 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 SLC27A4Q6P1M0 643 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 FBXO42Q6P3S6 717 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 SLC36A4Q6YBV0 504 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 RASSF6Q6ZTQ3 369 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 USP53Q70EK8 1073 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 ABHD13Q7L211 337 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 PEX5LQ8IYB4 626 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 ZNF655Q8N720 491 aaPredicted RBP13.93□□□□□ -0.18
NUP54-217ENST00000514987 OR52P1PQ8NH57 321 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 PIGXQ8TBF5 258 aa13.93□□□□□ -0.18
NUP54-217ENST00000514987 RSC1A1Q92681 617 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms