RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 WDR53Q7Z5U6 358 aaPredicted RBP12.85□□□□□ -0.35
USP46-209ENST00000514536 SLC44A2Q8IWA5 706 aaPredicted RBP12.85□□□□□ -0.35
USP46-209ENST00000514536 DND1Q8IYX4 353 aaKnown RBP12.85□□□□□ -0.35
USP46-209ENST00000514536 ARFGAP2Q8N6H7 521 aa12.85□□□□□ -0.35
USP46-209ENST00000514536 GALNT11Q8NCW6 608 aa12.85□□□□□ -0.35
USP46-209ENST00000514536 OR5P2Q8WZ92 322 aa12.85□□□□□ -0.35
USP46-209ENST00000514536 NR4A3Q92570 626 aa12.85□□□□□ -0.35
USP46-209ENST00000514536 OMA1Q96E52 524 aa12.85□□□□□ -0.35
USP46-209ENST00000514536 FRMD6Q96NE9 622 aa12.85□□□□□ -0.35
USP46-209ENST00000514536 BTBD9Q96Q07 612 aa12.85□□□□□ -0.35
USP46-209ENST00000514536 BHLHE41Q9C0J9 482 aaPredicted RBP12.85□□□□□ -0.35
USP46-209ENST00000514536 C3orf14Q9HBI5 128 aa12.85□□□□□ -0.35
USP46-209ENST00000514536 SH2D2AQ9NP31 389 aa12.85□□□□□ -0.35
USP46-209ENST00000514536 GPR45Q9Y5Y3 372 aa12.85□□□□□ -0.35
USP46-209ENST00000514536 A0A0G2JMM0 328 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 A0A1W2PPB8 328 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 A0A1W2PRS3 328 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 PINLYPA6NC86 204 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 KIR3DP1A8MWS1 328 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 TP53I11O14683 189 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 TO15178 435 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 ACOX3O15254 700 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 CFLARO15519 480 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 EMC8O43402 210 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 REM1O75628 298 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 TGDSO95455 350 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 CBX6O95503 412 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 ABCB1P08183 1280 aaPredicted RBP12.84□□□□□ -0.35
USP46-209ENST00000514536 IFI6P09912 130 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 GNLYP22749 145 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 TMED10P49755 219 aaKnown RBP12.84□□□□□ -0.35
USP46-209ENST00000514536 PSG6Q00889 435 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 ALDH6A1Q02252 535 aaKnown RBP12.84□□□□□ -0.35
USP46-209ENST00000514536 PLCXD2Q0VAA5 305 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 MRPL49Q13405 166 aaKnown RBP12.84□□□□□ -0.35
USP46-209ENST00000514536 RNFT1Q5M7Z0 435 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 OR4F3Q6IEY1 312 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 NPSR1Q6W5P4 371 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 ACAD11Q709F0 780 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 SZRD1Q7Z422 152 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 CAMKMTQ7Z624 323 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 SLC34A3Q8N130 599 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 NUP43Q8NFH3 380 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 OR2M7Q8NG81 312 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 PAQR8Q8TEZ7 354 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 TMBIM1Q969X1 311 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 MARK4Q96L34 752 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 TEX37Q96LM6 180 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 TSPAN10Q9H1Z9 355 aaPredicted RBP12.84□□□□□ -0.35
USP46-209ENST00000514536 EQTNQ9NQ60 294 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 SIRT3Q9NTG7 399 aaPredicted RBP12.84□□□□□ -0.35
USP46-209ENST00000514536 SNX8Q9Y5X2 465 aa12.84□□□□□ -0.35
USP46-209ENST00000514536 CHCHD2Q9Y6H1 151 aaPredicted RBP12.84□□□□□ -0.35
USP46-209ENST00000514536 C9JVG2 144 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 NPIPA5E9PKD4 350 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 UBDO15205 165 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 PPM1BO75688 479 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 PSMG1O95456 288 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 NAGAP17050 411 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 IL12AP29459 219 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 UQCRFS1P47985 274 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 DNASE1L1P49184 302 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 IDH3AP50213 366 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 CLNS1AP54105 237 aaKnown RBP12.83□□□□□ -0.36
USP46-209ENST00000514536 AQP5P55064 265 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 WNT3P56703 355 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 PHC1P78364 1004 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 SPANXN4Q5MJ08 99 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 PRAMEF20Q5VT98 475 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 DESI1Q6ICB0 168 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 OR4N2Q8NGD1 307 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 SPPL2AQ8TCT8 520 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 TESCQ96BS2 214 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 THOC1Q96FV9 657 aaKnown RBP12.83□□□□□ -0.36
USP46-209ENST00000514536 SLX1AQ9BQ83 275 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 FAM173AQ9BQD7 235 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 EBF4Q9BQW3 602 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 CXorf36Q9H7Y0 433 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 CNIH4Q9P003 139 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 NTMQ9P121 344 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 NPIPA1Q9UND3 350 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 OR10H1Q9Y4A9 318 aa12.83□□□□□ -0.36
USP46-209ENST00000514536 ANKUB1A6NFN9 424 aa12.82□□□□□ -0.36
USP46-209ENST00000514536 EDF1O60869 148 aaKnown RBP12.82□□□□□ -0.36
USP46-209ENST00000514536 EDN3P14138 238 aa12.82□□□□□ -0.36
USP46-209ENST00000514536 IDO1P14902 403 aa12.82□□□□□ -0.36
USP46-209ENST00000514536 ZNF24P17028 368 aa12.82□□□□□ -0.36
USP46-209ENST00000514536 S100A3P33764 101 aa12.82□□□□□ -0.36
USP46-209ENST00000514536 KIR3DL1P43629 444 aa12.82□□□□□ -0.36
USP46-209ENST00000514536 CCT3P49368 545 aaKnown RBP12.82□□□□□ -0.36
USP46-209ENST00000514536 TDGF1P3P51864 188 aa12.82□□□□□ -0.36
USP46-209ENST00000514536 PLGLB1Q02325 96 aa12.82□□□□□ -0.36
USP46-209ENST00000514536 GAB1Q13480 694 aa12.82□□□□□ -0.36
USP46-209ENST00000514536 ZNHIT3Q15649 155 aaPredicted RBP12.82□□□□□ -0.36
USP46-209ENST00000514536 FAM174BQ3ZCQ3 159 aa12.82□□□□□ -0.36
USP46-209ENST00000514536 NUP54Q7Z3B4 507 aa12.82□□□□□ -0.36
USP46-209ENST00000514536 CLECL1Q8IZS7 167 aa12.82□□□□□ -0.36
USP46-209ENST00000514536 ZFP62Q8NB50 900 aaPredicted RBP12.82□□□□□ -0.36
USP46-209ENST00000514536 POGLUT1Q8NBL1 392 aa12.82□□□□□ -0.36
USP46-209ENST00000514536 OR8J2Q8NGG1 315 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms