RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 SERHL2Q9H4I8 314 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 ABCB10Q9NRK6 738 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 IL17CQ9P0M4 197 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 NCDNQ9UBB6 729 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 MBD1Q9UIS9 605 aaPredicted RBP6.98□□□□□ -1.29
CLIP1-205ENST00000514271 NUP214P35658 2090 aaPredicted RBP6.98□□□□□ -1.29
CLIP1-205ENST00000514271 ZNF318Q5VUA4 2279 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 A0A1W2PP55 124 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 ANKRD66B4E2M5 251 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 M0R3G1 203 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 CCRL2O00421 344 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 UGDHO60701 494 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 HCN1O60741 890 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 TBX19O60806 448 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 TBX6O95947 436 aaPredicted RBP6.98□□□□□ -1.29
CLIP1-205ENST00000514271 RRASP10301 218 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 PCYT1AP49585 367 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 AFF3P51826 1226 aaKnown RBP6.98□□□□□ -1.29
CLIP1-205ENST00000514271 ZP1P60852 638 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 CDK5Q00535 292 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 C3orf38Q5JPI3 329 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 ADAMTSL4Q6UY14 1074 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 VTCN1Q7Z7D3 282 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 AMER2Q8N7J2 671 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 CHST14Q8NCH0 376 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 OR11H7Q8NGC8 314 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 OR5H6Q8NGV6 325 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 OR14C36Q8NHC7 312 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 PIH1D2Q8WWB5 315 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 TM9SF4Q92544 642 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 VPS35Q96QK1 796 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 CCM2Q9BSQ5 444 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 ZCCHC2Q9C0B9 1178 aaKnown RBP6.98□□□□□ -1.29
CLIP1-205ENST00000514271 NDEL1Q9GZM8 345 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 ING2Q9H160 280 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 MAN2C1Q9NTJ4 1040 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 ERVK13-1Q9NX77 482 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 TAS2R16Q9NYV7 291 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 ATP6V1HQ9UI12 483 aa6.98□□□□□ -1.29
CLIP1-205ENST00000514271 ING1Q9UK53 422 aaPredicted RBP6.98□□□□□ -1.29
CLIP1-205ENST00000514271 DIMT1Q9UNQ2 313 aaKnown RBP6.98□□□□□ -1.29
CLIP1-205ENST00000514271 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.98□□□□□ -1.29
CLIP1-205ENST00000514271 IGHA1P01876 353 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 STSP08842 583 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 EVI2BP34910 448 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 HNF4AP41235 474 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 WASP42768 502 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 SHC2P98077 582 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 MAD2L1Q13257 205 aaPredicted RBP6.97□□□□□ -1.29
CLIP1-205ENST00000514271 GPR19Q15760 415 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 TAS2R42Q7RTR8 314 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 COMTD1Q86VU5 262 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 FAM160A2Q8N612 972 aaPredicted RBP6.97□□□□□ -1.29
CLIP1-205ENST00000514271 YIPF7Q8N8F6 280 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 COQ10AQ96MF6 247 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 RBP7Q96R05 134 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 ZSCAN5AQ9BUG6 496 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 KATNB1Q9BVA0 655 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 TM6SF2Q9BZW4 377 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 RBFOX1Q9NWB1 397 aaKnown RBP6.97□□□□□ -1.29
CLIP1-205ENST00000514271 NKIRAS2Q9NYR9 191 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 PTTG3PQ9NZH4 202 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 ICKQ9UPZ9 632 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 CRYL1Q9Y2S2 319 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 LRP4O75096 1905 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 OR5K4A6NMS3 321 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 K7ERQ8 282 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 RFXANKO14593 260 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 SLC30A4O14863 429 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 AKR7A2O43488 359 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 VIPP01282 170 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 ELFN1P0C7U0 828 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 HSD3B1P14060 373 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 SLC2A4P14672 509 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 PTGER3P43115 390 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 RAG2P55895 527 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 OLR1P78380 273 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 E2F1Q01094 437 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 NHLH1Q02575 133 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 ILKQ13418 452 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 NFATC2Q13469 925 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 ARMCX4Q5H9R4 360 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 ADCK1Q86TW2 530 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 TRAM1L1Q8N609 369 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 FNDC5Q8NAU1 212 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 ST13P5Q8NFI4 369 aaPredicted RBP6.97□□□□□ -1.29
CLIP1-205ENST00000514271 FBXO30Q8TB52 745 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 MYDGFQ969H8 173 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 RNF166Q96A37 237 aaPredicted RBP6.97□□□□□ -1.29
CLIP1-205ENST00000514271 DTD2Q96FN9 168 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 TSNARE1Q96NA8 513 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 DOHHQ9BU89 302 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 SLC17A9Q9BYT1 436 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 RNF32Q9H0A6 362 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 BARX1Q9HBU1 254 aaPredicted RBP6.97□□□□□ -1.29
CLIP1-205ENST00000514271 PHPT1Q9NRX4 125 aaPredicted RBP6.97□□□□□ -1.29
CLIP1-205ENST00000514271 TXNL4BQ9NX01 149 aaKnown RBP6.97□□□□□ -1.29
CLIP1-205ENST00000514271 CBLCQ9ULV8 474 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 SATB2Q9UPW6 733 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 POFUT2Q9Y2G5 429 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms