RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 PLPP6Q8IY26 295 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 OXR1Q8N573 874 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 OR4F15Q8NGB8 312 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 HUS1BQ8NHY5 278 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 HMGB4Q8WW32 186 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 EXOSC8Q96B26 276 aaKnown RBP9.11□□□□□ -0.95
VCAN-210ENST00000513960 COQ10AQ96MF6 247 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 TEFMQ96QE5 360 aaKnown RBP9.11□□□□□ -0.95
VCAN-210ENST00000513960 THAP7Q9BT49 309 aaPredicted RBP9.11□□□□□ -0.95
VCAN-210ENST00000513960 OR51J1Q9H342 316 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 FOLH1BQ9HBA9 442 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 SPHK2Q9NRA0 654 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 EXO1Q9UQ84 846 aaKnown RBP9.11□□□□□ -0.95
VCAN-210ENST00000513960 LILRB3O75022 631 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 MSL3P1P0C860 447 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 GABRB1P18505 474 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 NUP62P37198 522 aaPredicted RBP9.11□□□□□ -0.95
VCAN-210ENST00000513960 TEAD2Q15562 447 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 AANATQ16613 207 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 MEDAGQ5VYS4 303 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 ZNF730Q6ZMV8 503 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 CLDN22Q8N7P3 220 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 SORCS1Q8WY21 1168 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 NANSQ9NR45 359 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 TBX21Q9UL17 535 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 MYOFQ9NZM1 2061 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 NRG2O14511 850 aaPredicted RBP9.11□□□□□ -0.95
VCAN-210ENST00000513960 MID1O15344 667 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 GATBO75879 557 aaKnown RBP9.11□□□□□ -0.95
VCAN-210ENST00000513960 SLCO2B1O94956 709 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 RAF1P04049 648 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 IFNA16P05015 189 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 ELFN1P0C7U0 828 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 CSF2RAP15509 400 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 PAICSP22234 425 aaKnown RBP9.11□□□□□ -0.95
VCAN-210ENST00000513960 RPL35P42766 123 aaKnown RBP9.11□□□□□ -0.95
VCAN-210ENST00000513960 CCR6P51684 374 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 CRYBA2P53672 197 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 CDH11P55287 796 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 WDR5P61964 334 aaKnown RBP9.11□□□□□ -0.95
VCAN-210ENST00000513960 MTAPQ13126 283 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 SEC23BQ15437 767 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 SFRP4Q6FHJ7 346 aaPredicted RBP9.11□□□□□ -0.95
VCAN-210ENST00000513960 SMARCD3Q6STE5 483 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 IZUMO1Q8IYV9 350 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 AP2M1Q96CW1 435 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 WDFY2Q96P53 400 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 CACNG6Q9BXT2 260 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 MS4A7Q9GZW8 240 aaPredicted RBP9.11□□□□□ -0.95
VCAN-210ENST00000513960 MCCC2Q9HCC0 563 aa9.11□□□□□ -0.95
VCAN-210ENST00000513960 TMEM202A6NGA9 273 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 NPIPB8E9PQR5 432 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 APOC3P02656 99 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 EPHX1P07099 455 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 IDSP22304 550 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 CD79BP40259 229 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 CCR2P41597 374 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 DGKGP49619 791 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 DEFA5Q01523 94 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 TNK1Q13470 666 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 MLIPQ5VWP3 458 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 TIGD3Q6B0B8 471 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 ZNF613Q6PF04 617 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 LILRA6Q6PI73 481 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 TMEM220Q6QAJ8 160 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 KCTD20Q7Z5Y7 419 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 TSEN54Q7Z6J9 526 aaKnown RBP9.1□□□□□ -0.95
VCAN-210ENST00000513960 MMP21Q8N119 569 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 ESX1Q8N693 406 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 OR8J2Q8NGG1 315 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 ZNF671Q8TAW3 534 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 TCEAL4Q96EI5 215 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 SLC38A2Q96QD8 506 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 TMEM43Q9BTV4 400 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 TAPBPLQ9BX59 468 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 ERVMER34-1Q9H9K5 563 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 OR6C2Q9NZP2 312 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 STOX2Q9P2F5 926 aaPredicted RBP9.1□□□□□ -0.95
VCAN-210ENST00000513960 FTSJ1Q9UET6 329 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 SCML1Q9UN30 329 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 WASH3PC4AMC7 463 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 LGALS8O00214 317 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 EFCAB14O75071 495 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 ADAP00813 363 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 HLA-DPB1P04440 258 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 CLTBP09497 229 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 ACRP10323 421 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 LCN1P31025 176 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 SLC3A1Q07837 685 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 ZNF630Q2M218 657 aaPredicted RBP9.1□□□□□ -0.95
VCAN-210ENST00000513960 TMEM65Q6PI78 240 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 ADCK2Q7Z695 626 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 OR52N2Q8NGI0 321 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 GLYATL1Q969I3 302 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 VOPP1Q96AW1 172 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 ERMAPQ96PL5 475 aaPredicted RBP9.1□□□□□ -0.95
VCAN-210ENST00000513960 SECISBP2Q96T21 854 aaKnown RBP9.1□□□□□ -0.95
VCAN-210ENST00000513960 TRAF4Q9BUZ4 470 aaPredicted RBP9.1□□□□□ -0.95
VCAN-210ENST00000513960 PRR14Q9BWN1 585 aa9.1□□□□□ -0.95
VCAN-210ENST00000513960 EGLN3Q9H6Z9 239 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms