RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 C6orf10Q5SRN2 563 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 C1orf220Q5T0J3 134 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 SLC22A10Q63ZE4 541 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 EMBQ6PCB8 327 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 CD300LGQ6UXG3 332 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 PAQR9Q6ZVX9 377 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 CXXC5Q7LFL8 322 aaKnown RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 PID1Q7Z2X4 250 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZNF595Q8IYB9 648 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 C17orf78Q8N4C9 275 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 ALLCQ8N6M5 410 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 ACBD4Q8NC06 268 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 PDPRQ8NCN5 879 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 ACOT11Q8WXI4 607 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 CCDC124Q96CT7 223 aaKnown RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 SNRNP40Q96DI7 357 aaKnown RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 COX4I2Q96KJ9 171 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 RAB40CQ96S21 281 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 TMEM209Q96SK2 561 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 FSD1LQ9BXM9 530 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 HOXD1Q9GZZ0 328 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZBP1Q9H171 429 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 NSUN3Q9H649 340 aaKnown RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 RANBP3Q9H6Z4 567 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 UBTD1Q9HAC8 227 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 LYRM4Q9HD34 91 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 GIN1Q9NXP7 522 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 ADA2Q9NZK5 511 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 RNF14Q9UBS8 474 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 DHRS7Q9Y394 339 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 HCFC2Q9Y5Z7 792 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 SLC22A7Q9Y694 548 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 URGCP-MRPS24S4R325 110 aa4.73□□□□□ -1.65
TRAPPC11-208ENST00000511955 WDFY4Q6ZS81 3184 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 METTL21EPA6NDL7 271 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 SERPINE3A8MV23 424 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 LINC00587B1AMM8 73 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 ACOT7O00154 380 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 PIRO00625 290 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 CCSO14618 274 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 OGG1O15527 345 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 DHHO43323 396 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 HUS1O60921 280 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 RFPL2O75678 378 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 VNN1O95497 513 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 FCGR1AP12314 374 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 CDH5P33151 784 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 MPIP34949 423 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 UGT2B10P36537 528 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 NDST1P52848 882 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 SNRPFP62306 86 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 KCNJ2P63252 427 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 FLI1Q01543 452 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 CHRNB3Q05901 458 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 CD69Q07108 199 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 ARHGEF7Q14155 803 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 TEX30Q5JUR7 227 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 TEX38Q6PEX7 206 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 GSTA5Q7RTV2 222 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 KMT5CQ86Y97 462 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 FUNDC1Q8IVP5 155 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 SIAH3Q8IW03 269 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 ENTHD1Q8IYW4 607 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 CYP4Z2PQ8N1L4 340 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 ELMOD1Q8N336 334 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 GTPBP8Q8N3Z3 284 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 FBXO39Q8N4B4 442 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 NETO2Q8NC67 525 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 SLC37A3Q8NCC5 494 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 VN1R2Q8NFZ6 395 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 LNX1Q8TBB1 728 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 RIT1Q92963 219 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 CAVIN3Q969G5 261 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 UTP4Q969X6 686 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 SLC35C1Q96A29 364 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 FICDQ9BVA6 458 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 LACRTQ9GZZ8 138 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 DPEP3Q9H4B8 488 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 GSX1Q9H4S2 264 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZCCHC4Q9H5U6 513 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 SMYD3Q9H7B4 428 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZBTB26Q9HCK0 441 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 C20orf141Q9NUB4 165 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 TMEM248Q9NWD8 314 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 DIMT1Q9UNQ2 313 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 FLVCR2Q9UPI3 526 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 OSGIN2Q9Y236 505 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 DYRK1BQ9Y463 629 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 TBL2Q9Y4P3 447 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 PCDHGC4Q9Y5F7 938 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 LOC102723971A0A1B0GUV8 181 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 A0A1W2PNR3 127 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 LNP1A1A4G5 178 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 ANKRD30BLA7E2S9 258 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 ARHGEF33A8MVX0 844 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 C9JVG2 144 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 DLGAP1O14490 977 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 SH3BGRLO75368 114 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 RSL1D1O76021 490 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 H6PDO95479 791 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms