RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 VCX3BQ9H321 246 aa4.63□□□□□ -1.67
NEK1-204ENST00000509912 TCEAL2Q9H3H9 227 aaPredicted RBP4.63□□□□□ -1.67
NEK1-204ENST00000509912 NT5DC2Q9H857 520 aa4.63□□□□□ -1.67
NEK1-204ENST00000509912 ACTR5Q9H9F9 607 aaPredicted RBP4.63□□□□□ -1.67
NEK1-204ENST00000509912 VPS37BQ9H9H4 285 aa4.63□□□□□ -1.67
NEK1-204ENST00000509912 TAAR2Q9P1P5 351 aa4.63□□□□□ -1.67
NEK1-204ENST00000509912 PISDQ9UG56 409 aa4.63□□□□□ -1.67
NEK1-204ENST00000509912 LOXL2Q9Y4K0 774 aa4.63□□□□□ -1.67
NEK1-204ENST00000509912 KLF2Q9Y5W3 355 aaPredicted RBP4.63□□□□□ -1.67
NEK1-204ENST00000509912 RNF215Q9Y6U7 377 aa4.63□□□□□ -1.67
NEK1-204ENST00000509912 KCNE1BA0A087WTH5 132 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 TLCD2A6NGC4 264 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 APOC4-APOC2K7ER74 178 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 APOC2P02655 101 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 RPLP0P05388 317 aaKnown RBP4.62□□□□□ -1.67
NEK1-204ENST00000509912 VIMP08670 466 aaKnown RBP4.62□□□□□ -1.67
NEK1-204ENST00000509912 ACVRL1P37023 503 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 FDFT1P37268 417 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 PRLHRP49683 370 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 CAPZA1P52907 286 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 CCL7P80098 99 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 SERPINA11Q86U17 422 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 EID3Q8N140 333 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 PGBD5Q8N414 524 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 HM13Q8TCT9 377 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 OR1E3Q8WZA6 343 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 STAMBPL1Q96FJ0 436 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 CCDC42Q96M95 316 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 TM6SF2Q9BZW4 377 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 KLK15Q9H2R5 256 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 PCDH9Q9HC56 1237 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 IL17CQ9P0M4 197 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 HEY2Q9UBP5 337 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 PCSK1NQ9UHG2 260 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 COLEC10Q9Y6Z7 277 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 ZNF462Q96JM2 2506 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 TMEM202A6NGA9 273 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 B4DGG1 531 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 FAM72CH0Y354 149 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 J3KR12 359 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 NDUFAB1O14561 156 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 ADAM10O14672 748 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 ZNF254O75437 659 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 UGT2B4P06133 528 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 SNRNP70P08621 437 aaKnown RBP4.62□□□□□ -1.67
NEK1-204ENST00000509912 PNMA6AP0CW24 399 aaPredicted RBP4.62□□□□□ -1.67
NEK1-204ENST00000509912 ZNF7P17097 686 aaPredicted RBP4.62□□□□□ -1.67
NEK1-204ENST00000509912 CYLC1P35663 651 aaPredicted RBP4.62□□□□□ -1.67
NEK1-204ENST00000509912 CAPZBP47756 277 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 KLHL30Q0D2K2 578 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 ZNF273Q14593 569 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 KIR2DS3Q14952 304 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 PNLIPRP3Q17RR3 467 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 PARP6Q2NL67 630 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 CCDC122Q5T0U0 273 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 FAM72AQ5TYM5 149 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 NSUN5P2Q63ZY6 315 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 FAM72DQ6L9T8 149 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 H3F3CQ6NXT2 135 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 TMEM26Q6ZUK4 368 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 WDR53Q7Z5U6 358 aaPredicted RBP4.62□□□□□ -1.67
NEK1-204ENST00000509912 PIM3Q86V86 326 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 FAM72BQ86X60 149 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 DND1Q8IYX4 353 aaKnown RBP4.62□□□□□ -1.67
NEK1-204ENST00000509912 ATPAF2Q8N5M1 289 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 IPMKQ8NFU5 416 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 GLYATL1Q969I3 302 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.62□□□□□ -1.67
NEK1-204ENST00000509912 MLPHQ9BV36 600 aaPredicted RBP4.62□□□□□ -1.67
NEK1-204ENST00000509912 FAM234AQ9H0X4 552 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 GBA3Q9H227 469 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 ACP6Q9NPH0 428 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 CYSLTR2Q9NS75 346 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 ACSS1Q9NUB1 689 aaPredicted RBP4.62□□□□□ -1.67
NEK1-204ENST00000509912 NLE1Q9NVX2 485 aaPredicted RBP4.62□□□□□ -1.67
NEK1-204ENST00000509912 FAM153AQ9UHL3 310 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.62□□□□□ -1.67
NEK1-204ENST00000509912 CLDN16Q9Y5I7 305 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 MACROD2A1Z1Q3 448 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 MGAT4DA6NG13 374 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 DPM1O60762 260 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 PALMO75781 387 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 AP2A1O95782 977 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 RPN2P04844 631 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 MPC1LP0DKB6 136 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 HPDP32754 393 aaPredicted RBP4.62□□□□□ -1.67
NEK1-204ENST00000509912 TNFSF8P32971 234 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 CETN2P41208 172 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 CDKN2BP42772 138 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 EEF1A1P68104 462 aaKnown RBP4.62□□□□□ -1.67
NEK1-204ENST00000509912 EEF1A2Q05639 463 aaKnown RBP4.62□□□□□ -1.67
NEK1-204ENST00000509912 TRAF2Q12933 501 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 CDSNQ15517 529 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 ODF3L2Q3SX64 289 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 TDRD12Q587J7 1177 aaKnown RBP4.62□□□□□ -1.67
NEK1-204ENST00000509912 EEF1A1P5Q5VTE0 462 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 AAGABQ6PD74 315 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 DCUN1D2Q6PH85 259 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 RBPMS2Q6ZRY4 209 aaKnown RBP4.62□□□□□ -1.67
NEK1-204ENST00000509912 OR2AK2Q8NG84 335 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms