RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 ZIC3O60481 467 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 CLDN9O95484 217 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 ACTL6AO96019 429 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 ATP1B1P05026 303 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 CHN1P15882 459 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 PORP16435 677 aaPredicted RBP12.12□□□□□ -0.47
DDX41-210ENST00000509576 TCEA1P23193 301 aaKnown RBP12.12□□□□□ -0.47
DDX41-210ENST00000509576 CORO7P57737 925 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 HMGCS1Q01581 520 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 FAM27E3Q08E93 113 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 ACAP2Q15057 778 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 HLA-DQA1Q5Y7H0 255 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 FRG2Q64ET8 278 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 VWA1Q6PCB0 445 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 ZNF474Q6S9Z5 364 aaPredicted RBP12.12□□□□□ -0.47
DDX41-210ENST00000509576 KIF18BQ86Y91 864 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 C7orf57Q8NEG2 295 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 OR7G1Q8NGA0 311 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 OR52R1Q8NGF1 315 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 PPP1R14CQ8TAE6 165 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 PHF21BQ96EK2 531 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 DACH2Q96NX9 599 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 FRG2BQ96QU4 278 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 CENPKQ9BS16 269 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 NTMT1Q9BV86 223 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 BRINP2Q9C0B6 783 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 METTL7AQ9H8H3 244 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 PRM3Q9NNZ6 103 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 ZDHHC18Q9NUE0 388 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 RNF14Q9UBS8 474 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 TRPS1Q9UHF7 1281 aa12.12□□□□□ -0.47
DDX41-210ENST00000509576 EXO1Q9UQ84 846 aaKnown RBP12.12□□□□□ -0.47
DDX41-210ENST00000509576 SONP18583 2426 aaKnown RBP12.11□□□□□ -0.47
DDX41-210ENST00000509576 A0A1W2PNV4 684 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 PRAMEF25A6NGN4 478 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 SYCE1LA8MT33 242 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 CAPN14A8MX76 684 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 TSPAN2O60636 221 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 PDYNP01213 254 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 CT45A8P0DMV1 189 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 CT45A9P0DMV2 189 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 CYP4B1P13584 511 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 ZNF708P17019 499 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 NAGAP17050 411 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 TMED10P49755 219 aaKnown RBP12.11□□□□□ -0.47
DDX41-210ENST00000509576 RAE1P78406 368 aaKnown RBP12.11□□□□□ -0.47
DDX41-210ENST00000509576 NKX6-1P78426 367 aaPredicted RBP12.11□□□□□ -0.47
DDX41-210ENST00000509576 CALCOCO2Q13137 446 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 CT45A2Q5DJT8 189 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 SGO1Q5FBB7 561 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 OR5M10Q6IEU7 315 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 SLC30A6Q6NXT4 461 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 CLEC9AQ6UXN8 241 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 NUP54Q7Z3B4 507 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 OR4F6Q8NGB9 312 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 OR4N2Q8NGD1 307 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 IGFBPL1Q8WX77 278 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 SMPDL3BQ92485 455 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 TMBIM1Q969X1 311 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 STARD4Q96DR4 205 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 LCORQ96JN0 433 aaPredicted RBP12.11□□□□□ -0.47
DDX41-210ENST00000509576 COX4I2Q96KJ9 171 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 WFIKKN1Q96NZ8 548 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 SERPINI1Q99574 410 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 SFXN3Q9BWM7 321 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 WDR41Q9HAD4 459 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 FLRT3Q9NZU0 649 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 ADAM29Q9UKF5 820 aa12.11□□□□□ -0.47
DDX41-210ENST00000509576 GPR55Q9Y2T6 319 aaPredicted RBP12.11□□□□□ -0.47
DDX41-210ENST00000509576 TO15178 435 aa12.1□□□□□ -0.47
DDX41-210ENST00000509576 ERAL1O75616 437 aaKnown RBP12.1□□□□□ -0.47
DDX41-210ENST00000509576 HEXAP06865 529 aa12.1□□□□□ -0.47
DDX41-210ENST00000509576 RPS17P08708 135 aaKnown RBP12.1□□□□□ -0.47
DDX41-210ENST00000509576 RHOXF2BP0C7M4 288 aa12.1□□□□□ -0.47
DDX41-210ENST00000509576 STX2P32856 288 aa12.1□□□□□ -0.47
DDX41-210ENST00000509576 PAFAH1B1P43034 410 aa12.1□□□□□ -0.47
DDX41-210ENST00000509576 CDH13P55290 713 aa12.1□□□□□ -0.47
DDX41-210ENST00000509576 NRG3P56975 720 aa12.1□□□□□ -0.47
DDX41-210ENST00000509576 PLCXD2Q0VAA5 305 aa12.1□□□□□ -0.47
DDX41-210ENST00000509576 NAB1Q13506 487 aa12.1□□□□□ -0.47
DDX41-210ENST00000509576 FAM83EQ2M2I3 478 aa12.1□□□□□ -0.47
DDX41-210ENST00000509576 GGTA1PQ4G0N0 100 aa12.1□□□□□ -0.47
DDX41-210ENST00000509576 ZNF628Q5EBL2 1059 aa12.1□□□□□ -0.47
DDX41-210ENST00000509576 CCNYL2Q5T2Q4 361 aa12.1□□□□□ -0.47
DDX41-210ENST00000509576 WNT2BQ93097 391 aa12.1□□□□□ -0.47
DDX41-210ENST00000509576 ISL2Q96A47 359 aa12.1□□□□□ -0.47
DDX41-210ENST00000509576 REPS1Q96D71 796 aa12.1□□□□□ -0.47
DDX41-210ENST00000509576 YIPF4Q9BSR8 244 aa12.1□□□□□ -0.47
DDX41-210ENST00000509576 RYDENQ9NUL5 291 aaKnown RBP12.1□□□□□ -0.47
DDX41-210ENST00000509576 BEX4Q9NWD9 120 aaPredicted RBP12.1□□□□□ -0.47
DDX41-210ENST00000509576 XPR1Q9UBH6 696 aa12.1□□□□□ -0.47
DDX41-210ENST00000509576 BCAP29Q9UHQ4 241 aa12.1□□□□□ -0.47
DDX41-210ENST00000509576 COL6A5A8TX70 2615 aa12.09□□□□□ -0.47
DDX41-210ENST00000509576 TRIM64A6NGJ6 449 aa12.09□□□□□ -0.47
DDX41-210ENST00000509576 TRIM64BA6NI03 449 aa12.09□□□□□ -0.47
DDX41-210ENST00000509576 H0Y3Z8 333 aa12.09□□□□□ -0.47
DDX41-210ENST00000509576 H7C1Q1 480 aa12.09□□□□□ -0.47
DDX41-210ENST00000509576 CTIFO43310 598 aaKnown RBP12.09□□□□□ -0.47
DDX41-210ENST00000509576 CGAP01215 116 aa12.09□□□□□ -0.47
DDX41-210ENST00000509576 DRD5P21918 477 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms