RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 VWA7Q9Y334 891 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 MDC1Q14676 2089 aaKnown RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 MED19A0JLT2 244 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 LMO7DNF2Z398 122 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 FAM72CH0Y354 149 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 GNB5O14775 395 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 DSCR3O14972 297 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SUV39H1O43463 412 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 INMTO95050 263 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 DDAH2O95865 285 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 S1PR4O95977 384 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CHRNB2P17787 502 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 IGFBP6P24592 240 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 DPP4P27487 766 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 NMBRP28336 390 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SLC6A6P31641 620 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 MLLT10P55197 1068 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 BPIFB3P59826 476 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 RPA4Q13156 261 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CHIT1Q13231 466 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 FZD2Q14332 565 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 KIR2DS3Q14952 304 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SYT16Q17RD7 645 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 TSTD2Q5T7W7 516 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 FAM72AQ5TYM5 149 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 FAM72DQ6L9T8 149 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CYP2R1Q6VVX0 501 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 B3GNT6Q6ZMB0 384 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 TMPRSS11AQ6ZMR5 421 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 QSOX2Q6ZRP7 698 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 FAM72BQ86X60 149 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SFRP1Q8N474 314 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF610Q8N9Z0 462 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 L3MBTL4Q8NA19 623 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 MUL1Q969V5 352 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 DDIT4LQ96D03 193 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 C7orf26Q96N11 449 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 TSC22D3Q99576 134 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 GPA33Q99795 319 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 UCK2Q9BZX2 261 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 MMADHCQ9H3L0 296 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 DLGAP2Q9P1A6 1054 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 DNAJB11Q9UBS4 358 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SLC7A11Q9UPY5 501 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PTPRQQ9UMZ3 2332 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 NYNRINQ9P2P1 1898 aaKnown RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.8□□□□□ -1.966e-7■■■□□ 15.2
NEDD4-208ENST00000508342 SCN1AP35498 2009 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 hCG_1818297A0A087WSY0 165 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 A0A0A6YYJ9 748 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 A0A0U1RQJ8 604 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PNMA8CA0A1B0GUJ8 204 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 TMEM120BA0PK00 339 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 BLACEA4D250 179 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 HHLA1C9JL84 531 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PTGES3LE9PB15 166 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CYP4B1P13584 511 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 BPIP17213 487 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 RAB4AP20338 218 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 MMP8P22894 467 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 KIR3DL1P43629 444 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 STC1P52823 247 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 NAGLUP54802 743 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 NIPAL4Q0D2K0 466 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CTBP1Q13363 440 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 NAB1Q13506 487 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SLBPQ14493 270 aaKnown RBP eCLIP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF267Q14586 743 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ABRAXAS2Q15018 415 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 GPR68Q15743 365 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SPIN3Q5JUX0 258 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 YOD1Q5VVQ6 348 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF565Q8N9K5 539 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 OR8S1Q8NH09 359 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 WFDC5Q8TCV5 224 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 HPS1Q92902 700 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SH3YL1Q96HL8 342 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 HS6ST2Q96MM7 605 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PSD2Q9BQI7 771 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PELOQ9BRX2 385 aaKnown RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 DHRS4Q9BTZ2 278 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 DDA1Q9BW61 102 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 AMBRA1Q9C0C7 1298 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 TCEAL2Q9H3H9 227 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 IFT46Q9NQC8 304 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PLSCR4Q9NRQ2 329 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF355PQ9NSJ1 428 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 MS4A12Q9NXJ0 267 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CLEC4EQ9ULY5 219 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PCDHGB6Q9Y5F9 930 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 DMRT1Q9Y5R6 373 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 KIAA1549LQ6ZVL6 1849 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SONP18583 2426 aaKnown RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 C2orf92A0A1B0GVN3 265 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 POM121BA6NF01 834 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 B4E171 279 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 LOC110117498-PIK3R3F6TDL0 507 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 HCRTR2O43614 444 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 NOS1APO75052 506 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SIX3O95343 332 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms