RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 CTSSP25774 331 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 ECHS1P30084 290 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 GCKP35557 465 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 HSD17B3P37058 310 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 PPICP45877 212 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 EMDP50402 254 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 DCAF7P61962 342 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 TRA2BP62995 288 aaKnown RBP10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 CLCQ05315 142 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 SNTA1Q13424 505 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 TEX35Q5T0J7 233 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 TGIF2LYQ8IUE0 185 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 TMEM151AQ8N4L1 468 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 MMGT1Q8N4V1 131 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 CDYL2Q8N8U2 506 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 NOA1Q8NC60 698 aaKnown RBP10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 CHDHQ8NE62 594 aaPredicted RBP10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 OR14L1PQ8NHC6 308 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 RDH11Q8TC12 318 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 ZPLD1Q8TCW7 415 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 TMBIM1Q969X1 311 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 C16orf45Q96MC5 204 aaPredicted RBP10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 TUBA1CQ9BQE3 449 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 TMUB1Q9BVT8 246 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 OR2B2Q9GZK3 357 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 TSPYL1Q9H0U9 437 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 ANKRA2Q9H9E1 313 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 CALHM2Q9HA72 323 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 NMRK1Q9NWW6 199 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 VPS29Q9UBQ0 182 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 FETUBQ9UGM5 382 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 UTS2RQ9UKP6 389 aa10.51□□□□□ -0.73
HMGCS1-204ENST00000507293 A0A087WUV0 522 aaPredicted RBP10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 H0Y3Z8 333 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 TO15178 435 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 PCDH7O60245 1069 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 NME6O75414 186 aaPredicted RBP10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 SUPT7LO94864 414 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 IL18BPO95998 194 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 KRT6AP02538 564 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 KRT6BP04259 564 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 IL3P08700 152 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 SNRPAP09012 282 aaKnown RBP10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 HSD3B1P14060 373 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 DNASE1P24855 282 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 HSD3B2P26439 372 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 OPRM1P35372 400 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 SLCO1A2P46721 670 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 KRT6CP48668 564 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 HTR6P50406 440 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 DGKQP52824 942 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 SRYQ05066 204 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 CSTF3Q12996 717 aaKnown RBP10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 DAZAP2Q15038 168 aaPredicted RBP10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 RASA2Q15283 850 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 UNC50Q53HI1 259 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 ZNF628Q5EBL2 1059 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 ZNF678Q5SXM1 525 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 FBXW10Q5XX13 1052 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 PAMR1Q6UXH9 720 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 KIF18BQ86Y91 864 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 WDSUB1Q8N9V3 476 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 OR9A2Q8NGT5 310 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 ZNF675Q8TD23 568 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 KAT2AQ92830 837 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 EXOSC8Q96B26 276 aaKnown RBP10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 COL21A1Q96P44 957 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 TMEM237Q96Q45 408 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 JKAMPQ9P055 326 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 TMEM216Q9P0N5 145 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 MCM8Q9UJA3 840 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 EXO1Q9UQ84 846 aaKnown RBP10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 DLGAP4Q9Y2H0 992 aa10.5□□□□□ -0.73
HMGCS1-204ENST00000507293 ITPR3Q14573 2671 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 EXOC1LA0A1B0GW35 172 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 OR6C70A6NIJ9 312 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 ERN1O75460 977 aaKnown RBP10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 REM1O75628 298 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 CBR3O75828 277 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 EPXP11678 715 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 CPN1P15169 458 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 KLK2P20151 261 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 TAC1P20366 129 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 HMOX2P30519 316 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 STARP49675 285 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 CORO7P57737 925 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 PPP2R2AP63151 447 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 RAE1P78406 368 aaKnown RBP10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 SORDQ00796 357 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 HMGCS1Q01581 520 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 FOXF2Q12947 444 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 ENPP6Q6UWR7 440 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 PLXDC2Q6UX71 529 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 GPRIN3Q6ZVF9 776 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 IFNEQ86WN2 208 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 TRIM42Q8IWZ5 723 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 CCDC116Q8IYX3 515 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 LINC01560Q8TB33 94 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 TMCO6Q96DC7 493 aa10.49□□□□□ -0.73
HMGCS1-204ENST00000507293 SLC35A4Q96G79 324 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms