RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 DLL4Q9NR61 685 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 RDH8Q9NYR8 311 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 ZNF840PA6NDX5 716 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 KDM4EB2RXH2 506 aaPredicted RBP16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 SYPP08247 313 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 IRF1P10914 325 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 GALP22466 123 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 PITPNBP48739 271 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 SLC36A2Q495M3 483 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 IDNKQ5T6J7 187 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 NDUFAF5Q5TEU4 345 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 HACD4Q5VWC8 232 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 C1orf94Q6P1W5 598 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 TPRG1Q6ZUI0 275 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 POGLUT1Q8NBL1 392 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 OR4K5Q8NGD3 323 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 ASIC4Q96FT7 647 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 MS4A3Q96HJ5 214 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 ZNF649Q9BS31 505 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 TMEM175Q9BSA9 504 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 PLA2G12AQ9BZM1 189 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 GPR52Q9Y2T5 361 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 KCNMB2Q9Y691 235 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 CKAP5Q14008 2032 aa16.13■□□□□ 0.17
SQSTM1-211ENST00000506690 LOC105369274A0A096LPK9 316 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 EEF1E1O43324 174 aaKnown RBP16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 SLCO2B1O94956 709 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 EIF4EP06730 217 aaKnown RBP16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 ACSM4P0C7M7 580 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 PRKACAP17612 351 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 CTGFP29279 349 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 MAPK8P45983 427 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 SLC6A11P48066 632 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 CSNK1DP48730 415 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 LSM11P83369 360 aaKnown RBP eCLIP16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 CCSMST1Q4G0I0 132 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 HBMQ6B0K9 141 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 TNFAIP8L2Q6P589 184 aaPredicted RBP16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 CXCL17Q6UXB2 119 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 LIPIQ6XZB0 460 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 SLCO4C1Q6ZQN7 724 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 OR4N4Q8N0Y3 316 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 SRFBP1Q8NEF9 429 aaKnown RBP16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 OR56A3Q8NH54 315 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 WFDC5Q8TCV5 224 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 NEURL3Q96EH8 262 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 SLC6A16Q9GZN6 736 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 KIF25Q9UIL4 384 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 SCP2D1Q9UJQ7 156 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 ICKQ9UPZ9 632 aa16.12■□□□□ 0.17
SQSTM1-211ENST00000506690 G3V3Q6 166 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 FOXE1O00358 373 aaPredicted RBP16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 SAP18O00422 153 aaKnown RBP16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 DVL2O14641 736 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 EFCAB14O75071 495 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 IFNA16P05015 189 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 AKR1A1P14550 325 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 GLULP15104 373 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 SRP9P49458 86 aaKnown RBP16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 DNAJB7Q7Z6W7 309 aaPredicted RBP16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 GPR135Q8IZ08 494 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 MORN4Q8NDC4 146 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 ASZ1Q8WWH4 475 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 NEIL2Q969S2 332 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 SCRN2Q96FV2 425 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 REG4Q9BYZ8 158 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 MAN2C1Q9NTJ4 1040 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 TRPM5Q9NZQ8 1165 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 CSNK1G3Q9Y6M4 447 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 hCG_1807616A0A1W2PRN6 198 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 FAM170BA6NMN3 283 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 CHST10O43529 356 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 NDUFA2O43678 99 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 NFATC1O95644 943 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 IMPA1P29218 277 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 MTNR1BP49286 362 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 PNLIPRP1P54315 467 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 BTN1A1Q13410 526 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 GSG1Q2KHT4 349 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 IER5LQ5T953 404 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 KRT74Q7RTS7 529 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 IQCHQ86VS3 1027 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 LINC00471Q8N535 108 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 OR10Z1Q8NGY1 313 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 OR2T4Q8NH00 348 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 ADAMTS14Q8WXS8 1223 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 VOPP1Q96AW1 172 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 LINC00052Q96N35 136 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 ABHD1Q96SE0 405 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 GPR62Q9BZJ7 368 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 SHARPINQ9H0F6 387 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 TAAR2Q9P1P5 351 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 ZNF624Q9P2J8 865 aaPredicted RBP16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 NPTNQ9Y639 398 aa16.11■□□□□ 0.17
SQSTM1-211ENST00000506690 SGTAO43765 313 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 SLC16A8O95907 504 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 HOXD10P28358 340 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 THBS2P35442 1172 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 MMP12P39900 470 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 ST3GAL2Q16842 350 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms