RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 HOXD4P09016 255 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 CT45A8P0DMV1 189 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 CT45A9P0DMV2 189 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 GLI4P10075 376 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 UROSP10746 265 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 DDCP20711 480 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 PRPH2P23942 346 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 SERPINB4P48594 390 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 CDK9P50750 372 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 VSNL1P62760 191 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 RPP38P78345 283 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 BTKQ06187 659 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 CRYZQ08257 329 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 PCLAFQ15004 111 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 KIAA0040Q15053 153 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 NNATQ16517 81 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 CT45A2Q5DJT8 189 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 WLSQ5T9L3 541 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 ZNF585AQ6P3V2 769 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 B3GNT6Q6ZMB0 384 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 NUP54Q7Z3B4 507 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 TRABD2AQ86V40 505 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 CCDC71Q8IV32 467 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 C4orf33Q8N1A6 199 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 RIBC1Q8N443 379 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 BANPQ8N9N5 519 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 OR9A2Q8NGT5 310 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 OR2W6PQ8NHA6 318 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 KAT2AQ92830 837 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 EXOSC8Q96B26 276 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 OMA1Q96E52 524 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 METTL2AQ96IZ6 378 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 JSRP1Q96MG2 331 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 VSTM2LQ96N03 204 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 NODALQ96S42 347 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 LDAHQ9H6V9 325 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 LGALS13Q9UHV8 139 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 MID2Q9UJV3 735 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 ACAD8Q9UKU7 415 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 EXO1Q9UQ84 846 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 GPR55Q9Y2T6 319 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 C15orf41Q9Y2V0 281 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 WBP11Q9Y2W2 641 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 PDZD2O15018 2839 aa8.3□□□□□ -1.08
PDLIM5-209ENST00000506632 A0A087WV62 115 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 OR6C70A6NIJ9 312 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 MYO1GB0I1T2 1018 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 SNPHO15079 494 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 UGT2B11O75310 529 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 PSMG1O95456 288 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 GABRA1P14867 456 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 ELAVL4P26378 380 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 GDF1P27539 372 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 MSX1P28360 303 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 PTPN6P29350 595 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 ADH7P40394 386 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 TRPC1P48995 793 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 PLCXD2Q0VAA5 305 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 SNTA1Q13424 505 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 IMPG1Q17R60 797 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 NHSL2Q5HYW2 709 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 CFAP157Q5JU67 520 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 SPDYAQ5MJ70 313 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 C1orf185Q5T7R7 199 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 TIGD3Q6B0B8 471 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 CLEC6AQ6EIG7 209 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 NOXRED1Q6NXP6 359 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 SLC30A6Q6NXT4 461 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 NPSR1Q6W5P4 371 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 Q6ZSR9 355 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 SEM1Q6ZVN7 128 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 C10orf107Q8IVU9 208 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 SRRM1Q8IYB3 904 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 ULK2Q8IYT8 1036 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 FAM9CQ8IZT9 166 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 OR7G2Q8NG99 324 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 AENQ8WTP8 325 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 C14orf79Q96F83 325 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 SLC35A4Q96G79 324 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 ZNF764Q96H86 408 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 APOPT1Q96IL0 206 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 FCRL1Q96LA6 429 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 GNRHR2Q96P88 292 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 TRMOQ9BU70 441 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 GATA5Q9BWX5 397 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 UCK2Q9BZX2 261 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 PRDM14Q9GZV8 571 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 STMN4Q9H169 189 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 TUBB1Q9H4B7 451 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 EXO5Q9H790 373 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 METTL7AQ9H8H3 244 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 ANKRA2Q9H9E1 313 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 RRAGDQ9NQL2 400 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 PFDN4Q9NQP4 134 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 GIMAP4Q9NUV9 329 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 PTGDR2Q9Y5Y4 395 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 ARHGAP21Q5T5U3 1957 aa8.29□□□□□ -1.08
PDLIM5-209ENST00000506632 CCDC168Q8NDH2 2452 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 MED12Q93074 2177 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 ANKHD1Q8IWZ3 2542 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms