RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 NRG3P56975 720 aa16.78■□□□□ 0.28
PDLIM7-216ENST00000506537 DCAF7P61962 342 aa16.78■□□□□ 0.28
PDLIM7-216ENST00000506537 KCNC4Q03721 635 aa16.78■□□□□ 0.28
PDLIM7-216ENST00000506537 ZNF155Q12901 538 aaPredicted RBP16.78■□□□□ 0.28
PDLIM7-216ENST00000506537 RPS6KA2Q15349 733 aa16.78■□□□□ 0.28
PDLIM7-216ENST00000506537 CPTPQ5TA50 214 aa16.78■□□□□ 0.28
PDLIM7-216ENST00000506537 PRAMEF20Q5VT98 475 aa16.78■□□□□ 0.28
PDLIM7-216ENST00000506537 DESI1Q6ICB0 168 aa16.78■□□□□ 0.28
PDLIM7-216ENST00000506537 WDR53Q7Z5U6 358 aaPredicted RBP16.78■□□□□ 0.28
PDLIM7-216ENST00000506537 CAMKMTQ7Z624 323 aa16.78■□□□□ 0.28
PDLIM7-216ENST00000506537 DYDC1Q8WWB3 177 aa16.78■□□□□ 0.28
PDLIM7-216ENST00000506537 CKAP2Q8WWK9 683 aa16.78■□□□□ 0.28
PDLIM7-216ENST00000506537 OMA1Q96E52 524 aa16.78■□□□□ 0.28
PDLIM7-216ENST00000506537 HSPBAP1Q96EW2 488 aa16.78■□□□□ 0.28
PDLIM7-216ENST00000506537 ACBD3Q9H3P7 528 aa16.78■□□□□ 0.28
PDLIM7-216ENST00000506537 AIG1Q9NVV5 245 aa16.78■□□□□ 0.28
PDLIM7-216ENST00000506537 TAS2R9Q9NYW1 312 aa16.78■□□□□ 0.28
PDLIM7-216ENST00000506537 CNOT11Q9UKZ1 510 aaKnown RBP16.78■□□□□ 0.28
PDLIM7-216ENST00000506537 PPM1BO75688 479 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 P04436 131 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 ABCB1P08183 1280 aaPredicted RBP16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 CNR1P21554 472 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 GPC1P35052 558 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 KCNK10P57789 538 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 PSG6Q00889 435 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 ALDH6A1Q02252 535 aaKnown RBP16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 SRSF1Q07955 248 aaKnown RBP eCLIP16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 PLCXD2Q0VAA5 305 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 MLC1Q15049 377 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 EIF2S3LQ2VIR3 472 aaKnown RBP16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 SLC22A10Q63ZE4 541 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 BICRALQ6AI39 1079 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 FAM47EQ6ZV65 393 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 SLC34A3Q8N130 599 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 FBXW8Q8N3Y1 598 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 POGLUT1Q8NBL1 392 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 HGDQ93099 445 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 TMBIM1Q969X1 311 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 OR52B2Q96RD2 323 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 FAM173AQ9BQD7 235 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 CLMPQ9H6B4 373 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 NTMQ9P121 344 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 USH1CQ9Y6N9 552 aa16.77■□□□□ 0.28
PDLIM7-216ENST00000506537 NAV2Q8IVL1 2488 aa16.77■□□□□ 0.27
PDLIM7-216ENST00000506537 USP9XQ93008 2570 aaPredicted RBP16.77■□□□□ 0.27
PDLIM7-216ENST00000506537 ESPL1Q14674 2120 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 A0A1W2PRB8 838 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 NPIPA5E9PKD4 350 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 DDX5P17844 614 aaKnown RBP16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 TMED10P49755 219 aaKnown RBP16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 WNT3P56703 355 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 FOXO1Q12778 655 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 TMEM198Q66K66 360 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 SLC44A2Q8IWA5 706 aaPredicted RBP16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 OR4N2Q8NGD1 307 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 SPPL2AQ8TCT8 520 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 ACTRT2Q8TDY3 377 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 GIMAP5Q96F15 307 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 TEX37Q96LM6 180 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 MAGEB18Q96M61 343 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 GPR137Q96N19 417 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 DUSP26Q9BV47 211 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 DPY30Q9C005 99 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 BHLHE41Q9C0J9 482 aaPredicted RBP16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 EQTNQ9NQ60 294 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 ATAD3AQ9NVI7 634 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 TUBA8Q9NY65 449 aaPredicted RBP16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 NPIPA1Q9UND3 350 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 ZGRF1Q86YA3 2104 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 POLEQ07864 2286 aa16.76■□□□□ 0.27
PDLIM7-216ENST00000506537 HIVEP3Q5T1R4 2406 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 CLEC18AA5D8T8 446 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 LRRC3CA6NJW4 275 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 CAPN14A8MX76 684 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 UGT2B11O75310 529 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 GLSO94925 669 aaPredicted RBP16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 UNC5CO95185 931 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 C6orf47O95873 294 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 NAGAP17050 411 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 NME5P56597 212 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 PHC1P78364 1004 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 PGS1Q32NB8 556 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 OR4F3Q6IEY1 312 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 CLEC18BQ6UXF7 455 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 GK5Q6ZS86 529 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 SPATA19Q7Z5L4 167 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 CLEC18CQ8NCF0 446 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 PSMA8Q8TAA3 256 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 OR5P2Q8WZ92 322 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 HOXB13Q92826 284 aaPredicted RBP16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 NTNG2Q96CW9 530 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 FAM120BQ96EK7 910 aaKnown RBP16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 MARK4Q96L34 752 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 PRPF18Q99633 342 aaKnown RBP16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 LMF2Q9BU23 707 aaKnown RBP16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 TTTY12Q9BZ98 90 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 CXorf36Q9H7Y0 433 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 CNIH4Q9P003 139 aa16.75■□□□□ 0.27
PDLIM7-216ENST00000506537 SEC14L3Q9UDX4 400 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms