RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 DPY19L4Q7Z388 723 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 RBM23Q86U06 439 aaKnown RBP3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 SLC22A9Q8IVM8 553 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 BBS5Q8N3I7 341 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 NECAB1Q8N987 351 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 AKR7LQ8NHP1 331 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 NT5C3BQ969T7 300 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 LYZL4Q96KX0 146 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 C19orf43Q9BQ61 176 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 TMEM43Q9BTV4 400 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 APOOQ9BUR5 198 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 AIPL1Q9NZN9 384 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 CRLS1Q9UJA2 301 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 RPH3ALQ9UNE2 315 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 EIF3LQ9Y262 564 aaKnown RBP3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 DHRS7Q9Y394 339 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 A0A0A6YYD4 124 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 LRIT2A6NDA9 550 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 A8MU76 341 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 IMPA2O14732 288 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 ACOT8O14734 319 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 CASQ2O14958 399 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 ZSCAN12O43309 604 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 SMAD6O43541 496 aaKnown RBP3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 PCDH7O60245 1069 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 ERLIN1O75477 346 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 SCGNO76038 276 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 TOXO94900 526 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 IGHEP01854 428 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 CAPN1P07384 714 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 ERVK-10P10266 1014 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 H2AFXP16104 143 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 NCF2P19878 526 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 UQCRC2P22695 453 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 EDNRAP25101 427 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 FCGR2CP31995 323 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 RFC2P35250 354 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 CRYBA2P53672 197 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 LINC00205P59089 165 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 ERVK-16P61578 105 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 CSTF1Q05048 431 aaKnown RBP3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 FGL1Q08830 312 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 ITPK1Q13572 414 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 TFDP1Q14186 410 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 SSX2Q16385 188 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 CAMK4Q16566 473 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 PYHIN1Q6K0P9 492 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 KIAA1161Q6NSJ0 714 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 FIP1L1Q6UN15 594 aaKnown RBP3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 RUFY3Q7L099 469 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 PTAR1Q7Z6K3 402 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 LRRC75A-AS1Q8N1F1 130 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 RFLNBQ8N5W9 214 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 BRSK1Q8TDC3 778 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 SLCO2A1Q92959 643 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 DLX4Q92988 240 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 UPRTQ96BW1 309 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 ALKBH3Q96Q83 286 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 SLC30A2Q9BRI3 323 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 FEM1AQ9BSK4 669 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 Q9HAA7 133 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 PLEKHA3Q9HB20 300 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 ZNF334Q9HCZ1 680 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 NRN1Q9NPD7 142 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 FAM114A2Q9NRY5 505 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 DUS2Q9NX74 493 aaKnown RBP3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 NLGN3Q9NZ94 848 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 MBD2Q9UBB5 411 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 EIF3KQ9UBQ5 218 aaKnown RBP3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 CIDEBQ9UHD4 219 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 GSTK1Q9Y2Q3 226 aa3.33□□□□□ -1.88
TRAPPC13-208ENST00000505553 ATP10DQ9P241 1426 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 TRAV26-1A0A087WT03 109 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 A0A087WW49 117 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 A0A1W2PR80 420 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 HELTA6NFD8 242 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 C15orf61A6NNL5 157 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 P2RY10O00398 339 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 BUB3O43684 328 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 DUX1O43812 170 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 ECI2O75521 394 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 NEBLO76041 1014 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 SERPINA3P01011 423 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 F7P08709 466 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 FGF3P11487 239 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 CPN1P15169 458 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 ID1P41134 155 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 GRIA1P42261 906 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 ATP5OP48047 213 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 RAG2P55895 527 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 DHODHQ02127 395 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 MAP2K1Q02750 393 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 GBE1Q04446 702 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 MXD4Q14582 209 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 EMC2Q15006 297 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 SYPL1Q16563 259 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 CFAP221Q4G0U5 840 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 PHYHD1Q5SRE7 291 aa3.32□□□□□ -1.88
TRAPPC13-208ENST00000505553 NEPROQ6NW34 567 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms