RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 MRPL38Q96DV4 380 aaKnown RBP5.66□□□□□ -1.5
LINC01340-201ENST00000504012 TMEM176AQ96HP8 235 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 C12orf42Q96LP6 360 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 CMTM3Q96MX0 182 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 TAAR9Q96RI9 348 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 ATOH8Q96SQ7 321 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 ZNF382Q96SR6 550 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 WDR77Q9BQA1 342 aaPredicted RBP5.66□□□□□ -1.5
LINC01340-201ENST00000504012 MESP1Q9BRJ9 268 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 ZPBPQ9BS86 351 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 SYT17Q9BSW7 474 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 GGACTQ9BVM4 153 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 MRPL37Q9BZE1 423 aaKnown RBP5.66□□□□□ -1.5
LINC01340-201ENST00000504012 POLR2J2Q9GZM3 115 aaKnown RBP5.66□□□□□ -1.5
LINC01340-201ENST00000504012 SPRTNQ9H040 489 aaPredicted RBP5.66□□□□□ -1.5
LINC01340-201ENST00000504012 TOLLIPQ9H0E2 274 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 MTG2Q9H4K7 406 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 ACTL8Q9H568 366 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 METTL17Q9H7H0 456 aaPredicted RBP5.66□□□□□ -1.5
LINC01340-201ENST00000504012 AGO3Q9H9G7 860 aaKnown RBP5.66□□□□□ -1.5
LINC01340-201ENST00000504012 CERS4Q9HA82 394 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 GPN1Q9HCN4 374 aaPredicted RBP5.66□□□□□ -1.5
LINC01340-201ENST00000504012 MIEF1Q9NQG6 463 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 EXOSC3Q9NQT5 275 aaKnown RBP5.66□□□□□ -1.5
LINC01340-201ENST00000504012 NUDT15Q9NV35 164 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 GPATCH2LQ9NWQ4 482 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 GFOD1Q9NXC2 390 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 UBP1Q9NZI7 540 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 RPS6KB2Q9UBS0 482 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 ZNF629Q9UEG4 869 aaPredicted RBP5.66□□□□□ -1.5
LINC01340-201ENST00000504012 FKBPLQ9UIM3 349 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 FZD10Q9ULW2 581 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 ADAMTS5Q9UNA0 930 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 FNDC3AQ9Y2H6 1198 aaKnown RBP5.66□□□□□ -1.5
LINC01340-201ENST00000504012 KCNIP3Q9Y2W7 256 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 DHRS7Q9Y394 339 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 CHST2Q9Y4C5 530 aa5.66□□□□□ -1.5
LINC01340-201ENST00000504012 TMEM184BQ9Y519 407 aaPredicted RBP5.66□□□□□ -1.5
LINC01340-201ENST00000504012 POLR3HQ9Y535 204 aaPredicted RBP5.66□□□□□ -1.5
LINC01340-201ENST00000504012 ZNF638Q14966 1978 aaKnown RBP5.66□□□□□ -1.5
LINC01340-201ENST00000504012 LY75O60449 1722 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 SIP14410 1827 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 A0A087WZ62 844 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 TRBV23-1A0A0A0MS06 115 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 OR6C68A6NDL8 312 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 TMEM210A6NLX4 147 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 B4E171 279 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 F5H0A9 414 aaPredicted RBP5.65□□□□□ -1.5
LINC01340-201ENST00000504012 M0R3H8 397 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 DCLK1O15075 740 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 EIF4E2O60573 245 aaKnown RBP5.65□□□□□ -1.5
LINC01340-201ENST00000504012 KERAO60938 352 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 TMEM127O75204 238 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 LATS1O95835 1130 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 SOD1P00441 154 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 ALDOBP05062 364 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 ICAM1P05362 532 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 PFKMP08237 780 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 ATXN1LP0C7T5 689 aaKnown RBP5.65□□□□□ -1.5
LINC01340-201ENST00000504012 LINC00614P0C842 121 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 GKN3PP0CG01 181 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 MYCLP12524 364 aaPredicted RBP5.65□□□□□ -1.5
LINC01340-201ENST00000504012 MTHFD2P13995 350 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 HIST1H1BP16401 226 aaKnown RBP5.65□□□□□ -1.5
LINC01340-201ENST00000504012 NDUFB7P17568 137 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 POU3F2P20265 443 aaPredicted RBP5.65□□□□□ -1.5
LINC01340-201ENST00000504012 AKAP5P24588 427 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 MST1P26927 711 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 CERS1P27544 350 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 MSX1P28360 303 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 MAS1LP35410 378 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 SLC1A2P43004 574 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 CRATP43155 626 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 PITPNBP48739 271 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 MTNR1BP49286 362 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 SULT1E1P49888 294 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 EPHB3P54753 998 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 FOXA1P55317 472 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 DLX5P56178 289 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 CLDN8P56748 225 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 NUTF2P61970 127 aaKnown RBP5.65□□□□□ -1.5
LINC01340-201ENST00000504012 HTRA3P83110 453 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 NHLH2Q02577 135 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 PPP1R8Q12972 351 aaKnown RBP5.65□□□□□ -1.5
LINC01340-201ENST00000504012 CTBP1Q13363 440 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 SF1Q15637 639 aaKnown RBP5.65□□□□□ -1.5
LINC01340-201ENST00000504012 SLC36A2Q495M3 483 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 TMEM255AQ5JRV8 349 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 NKAPLQ5M9Q1 402 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 FAM74A1Q5RGS3 127 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 MANEAQ5SRI9 462 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 LIPJQ5W064 366 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 CYB5RLQ6IPT4 315 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 DEF8Q6ZN54 512 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 Q6ZSR9 355 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 ABHD13Q7L211 337 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 DPPA2Q7Z7J5 298 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 OAFQ86UD1 273 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 UNC93AQ86WB7 457 aa5.65□□□□□ -1.5
LINC01340-201ENST00000504012 STK40Q8N2I9 435 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms