RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 FTH1P02794 183 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 ALPPP05187 535 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 GSTP1P09211 210 aaKnown RBP4.24□□□□□ -1.73
MATR3-202ENST00000502422 ANKRD34CP0C6C1 535 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 ERVK-10P10266 1014 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 NCK1P16333 377 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 CHRM3P20309 590 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 GPX3P22352 226 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 HRH2P25021 359 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 MIPP30301 263 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 SDC4P31431 198 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 GLRBP48167 497 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 PRIM2P49643 509 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 PGGT1BP53609 377 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 UGT2B15P54855 530 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 ITGA1P56199 1179 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 DEFA1P59665 94 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 DEFA3P59666 94 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 RPS18P62269 152 aaKnown RBP4.24□□□□□ -1.73
MATR3-202ENST00000502422 SLC35A2P78381 396 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 CD83Q01151 205 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 EPS8Q12929 822 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 TRAF3Q13114 568 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 CDK5R2Q13319 367 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 GALEQ14376 348 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 CAPRIN1Q14444 709 aaKnown RBP4.24□□□□□ -1.73
MATR3-202ENST00000502422 GBX1Q14549 363 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 ZNF267Q14586 743 aaPredicted RBP4.24□□□□□ -1.73
MATR3-202ENST00000502422 UGT8Q16880 541 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 FAM72AQ5TYM5 149 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 LYPLAL1Q5VWZ2 237 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 KDM4DQ6B0I6 523 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 GLYATQ6IB77 296 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 FAM72DQ6L9T8 149 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 TMEM81Q6P7N7 255 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 FIP1L1Q6UN15 594 aaKnown RBP4.24□□□□□ -1.73
MATR3-202ENST00000502422 LHFPL2Q6ZUX7 228 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 PLEKHM3Q6ZWE6 761 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 GDF7Q7Z4P5 450 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 GPAT4Q86UL3 456 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 FAM72BQ86X60 149 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 ZSWIM9Q86XI8 627 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 XYLT1Q86Y38 959 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 PLD3Q8IV08 490 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 TAGAPQ8N103 731 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 EMC1Q8N766 993 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 YIPF7Q8N8F6 280 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 RTL3Q8N8U3 475 aaKnown RBP4.24□□□□□ -1.73
MATR3-202ENST00000502422 Q8NA96 180 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 AVL9Q8NBF6 648 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 KCTD6Q8NC69 237 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 FDCSPQ8NFU4 85 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 RDH11Q8TC12 318 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 MCOLN3Q8TDD5 553 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 CT55Q8WUE5 264 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 ANKRD49Q8WVL7 239 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 TMBIM1Q969X1 311 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.24□□□□□ -1.736e-7■■■□□ 15.7
MATR3-202ENST00000502422 DACT3Q96B18 629 aaPredicted RBP4.24□□□□□ -1.73
MATR3-202ENST00000502422 TGM7Q96PF1 710 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 SIGLEC11Q96RL6 698 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 SECISBP2Q96T21 854 aaKnown RBP4.24□□□□□ -1.73
MATR3-202ENST00000502422 RBBP8Q99708 897 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 WACQ9BTA9 647 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 CINPQ9BW66 212 aaPredicted RBP4.24□□□□□ -1.73
MATR3-202ENST00000502422 CEP41Q9BYV8 373 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 C6orf62Q9GZU0 229 aaPredicted RBP4.24□□□□□ -1.73
MATR3-202ENST00000502422 NUAK2Q9H093 628 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 MMP28Q9H239 520 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 KAT8Q9H7Z6 458 aaKnown RBP4.24□□□□□ -1.73
MATR3-202ENST00000502422 NIPAL2Q9H841 368 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 MEAF6Q9HAF1 191 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 SMURF2Q9HAU4 748 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 ZBTB20Q9HC78 741 aaPredicted RBP4.24□□□□□ -1.73
MATR3-202ENST00000502422 SLC52A3Q9NQ40 469 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 IARS2Q9NSE4 1012 aaKnown RBP4.24□□□□□ -1.73
MATR3-202ENST00000502422 PIH1D1Q9NWS0 290 aaKnown RBP4.24□□□□□ -1.73
MATR3-202ENST00000502422 GPR83Q9NYM4 423 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 ACTR10Q9NZ32 417 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 BFARQ9NZS9 450 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 LHX3Q9UBR4 397 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 ADGRE2Q9UHX3 823 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 TEKT2Q9UIF3 430 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 TRMT6Q9UJA5 497 aaKnown RBP4.24□□□□□ -1.73
MATR3-202ENST00000502422 FARSAQ9Y285 508 aaKnown RBP4.24□□□□□ -1.73
MATR3-202ENST00000502422 TRAPPC4Q9Y296 219 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 SLC17A4Q9Y2C5 497 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 ZNF175Q9Y473 711 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 PCDHA9Q9Y5H5 950 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 HSPE1-MOB4S4R3N1 261 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 DIDO1Q9BTC0 2240 aaKnown RBP4.24□□□□□ -1.73
MATR3-202ENST00000502422 SETD2Q9BYW2 2564 aaPredicted RBP4.24□□□□□ -1.73
MATR3-202ENST00000502422 APCP25054 2843 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 MED13LQ71F56 2210 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 A0A1B0GVC2 190 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 ATP6AP2A0A1C7CYW4 349 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 OR2A25A4D2G3 310 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 OR6C70A6NIJ9 312 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 ZNF98A6NK75 572 aa4.24□□□□□ -1.73
MATR3-202ENST00000502422 TRPC5OSA6NMA1 111 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms